Gene detail information of Glyur000505s00021221 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61600.1 | 1.00E-98 | Protein of unknown function (DUF1262) |
| NR | XP_003554966.1 | 0 | PREDICTED: uncharacterized protein LOC100811822 [Glycine max] |
| trEMBL | tr|I1N6L3|I1N6L3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G05620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00505 | 103107 | 105118 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000505s00021221.1 | PF06880.6 | DUF1262 | 23 | 122 | 3.10E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.535 |
| SRR1783600 | control | 8.628 |
| SRR1783602 | moderate drought stress | 8.424 |
| SRR1811619 | moderate drought stress | 8.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.976 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.666 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.185 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.179 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.420 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.305 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.174 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.410 |
| SRR2868004 | Drought Stress (root) | 31.185 |
| SRR2967015 | Control (root) | 21.928 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.398 |
| SRR9715740 | Leaf | 2.419 |
| SRR9715741 | Leaf | 4.981 |
| SRR9715739 | Root | 0.512 |
| SRR9715742 | Root | 5.404 |
| SRR9715743 | Root | 5.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.063 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.283 |
| SRR8400027 | Control - Root | 5.406 |