Gene detail

Gene detail information of Glyur000504s00018081

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G49920.1	4.00E-12	MuDR family transposase
NR	XP_004489869.1	3.28E-66	PREDICTED: uncharacterized protein LOC101510316 [Cicer arietinum]
trEMBL	tr\|M5X0G1\|M5X0G1_PRUPE	2.00E-39	Uncharacterized protein {ECO:0000313\|EMBL:EMJ12535.1} (Fragment)

Sequence

Transcript Sequence

>Glyur000504s00018081.1
ATGAGTTTGTTTAATGTATATTTTAACCATGGGGGAGGGTATATTGATGACAGTAGTGAATATTATGGTGGGGTGGTGCATGCTGAGTATGGGTGTGACATTGATAGGTGGAGTTACTATGAAGCTATATCTATACTTAGGTATTTGGGATATAGTACTGTGACTTCTGTTTTACGCCTATTTTGGAAGACTGGTGATGAATACTCAGAAGATGGGTTAAGGGAAATGAAAAATGACAGAGATGCTATTGCCTTTGCTAATCAGGCTATAGCTAATAATGGTGAGGGTGATTTATATGTGACTGAAGTCAAGAATAGGGATACTGGTGAGGTAGTGCAGAGAGAACCATCACTTAGTTTGCCTTTCACTGACACTGCAACAATTATAAGCAGACTGGTGGGTCGTTTGACTGAAAGTTGTGGTGTGAATGACCCTAGTACTGGTGGGAGTGGAAGTGGTGCAACTGGTGGTGTGAATGAAGATGCTGATGTGATTTACATAGGTGAAGGGTGGGTTGGTGGTGATATTACTGATTGTAATGGTGGGGATCAGGAGGTGATTGGCAATGGTGGAGGGGATGAGGAAGTGACCGTGAATGGTGAAGGGGTTGAGGAAGTGACTGTGAATGGTGGAGGTGAGGAGGTGACTGGGAATGGTGGAGGTGAGGAGGTTAGTGGTGAAAGTGAGCATGATTCTGATGATGGGTTCCTATTTGATGATAGTGAGGAGGATAGGCTCTTGGGTTGGATGATGGATTTGATGATGGTGAACTTGGTAATGATGGTTTGGTTAACCAAGTACATGAGTGAAGAGTTGGATAGTTATGATGGGGTGGACTCTGACAGTGGGGTGATAGCTAGATATCCCCAATTCAGAAAAGAGGAGCTAGACAAGAGATTCAAATTTAAGGAAGTTGTATTTGCAAAAAACGATAAAGTAAGAGTGAGGGCAGTGTGTAAGTGTAAGGGAAATTGTGACTTTGTAGCTCTTGTTAGTAGGCACACGTGTGGTAGGGTTTTTGCTAATAAAAATGCAAAGGCAAAGTGGGTTGCGGAGCATGTGATGGAGAAGCTAAGGGGGACAAGCGATGCAAAGAAAATTGCCAAGGAAGCTGTTGAAGGAGATGCAGCAAGGCCAAGGCAATACAACCTTCTATGGAGATACTGTGTTGAGCTAAGGAGATCATCTACTGGGAATACATGTAGACTATTGGTAGAAAGACCCTGCCCAACACTTTCTCCAAGGCCTTTTATTGGGGTGGATGGGTGTCATTTGAAGACAAAGTATGGGGGTCAGTTATTGGTTGTAGTTGGGAGAGATCCAAATGACCAGTACTATCCATTGGCTTTTGCTGTAGTTGAGACAGAGACAAAAGAGTCGTGGAGGTGGTTCCTGACTTTGTTGTTGCAAGATATTGGAGAAGATAGAAGATGGGTCTTTATATTCAGACCAACAAAAGTTGGGAGAGATCCAAATGACCAGTACTATCCATTGGCTTTTGCTGTAGTTGAGACAGAGACAAAAGAGTCGTGGAGGTGGTTCCTGACTTTGTTGTTGCAAGATATTGGAGAAGATAGAAGATGGGTCTTTATATCAAACCAACAAAAGATGATGGAAGGTGTGGAGCATAGATTCTGCTTAAGGCATCTTTATGGAAATTTTAAAAAGAAGTTCGGTGGGGGTACACTGATTAGGGACTTAATGATGGGTGCAGCAAAGGCTACCTACTATCAGGCTTGGTGGGAGAATATAGGTGAGATCAAGAAGCTGGATGCCAAGGCACATGACTGGCTTATTGCCATTCCTCCCAGACAGTGGTTTGTAACTTTTGGGAGTTGGTTGGGATACCCTGTAGGCATGCAGTGGCTGCCATATCATATAGAGGGGGTCAGAAGAGGGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00504	103863	106683	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000504s00018081.1	PF10551.4	MULE	423	480	3.30E-09
Glyur000504s00018081.1	PF10551.4	MULE	487	555	4.90E-12

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.171
SRR1783600	control	0.177
SRR1783602	moderate drought stress	0.299
SRR1811619	moderate drought stress	0.332

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.126
DRR006520	Root Summer glycyrrhizin high producing strain	0.180
DRR006521	Root Winter glycyrrhizin high producing strain	0.048
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.451
DRR006524	Root Summer glycyrrhizin low producing strain	0.232
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.124
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.137

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.006
SRR2868004	Drought Stress (root)	1.255
SRR2967015	Control (root)	1.077

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.240
SRR9715740	Leaf	1.032
SRR9715741	Leaf	1.629
SRR9715739	Root	0.377
SRR9715742	Root	1.401
SRR9715743	Root	1.356

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.322
SRR8749028	MeJA induced 9h	6.930
SRR8749029	MeJA induced 9h	2.004
SRR8749030	Uninduced	3.970
SRR8749031	Uninduced	5.678
SRR8749032	Uninduced	2.629

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.000
SRR8400027	Control - Root	2.224