Gene detail information of Glyur000504s00018076 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G10250.2 | 6.00E-60 | Plant protein 1589 of unknown function |
| NR | KEH41472.1 | 7.80E-161 | hypothetical protein MTR_1g051245 [Medicago truncatula] |
| trEMBL | tr|A0A072VI51|A0A072VI51_MEDTR | 3.00E-161 | Uncharacterized protein {ECO:0000313|EMBL:KEH41472.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00504 | 58386 | 67525 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000504s00018076.1 | PF09713.5 | A_thal_3526 | 64 | 134 | 1.70E-22 |
| Glyur000504s00018076.2 | PF09713.5 | A_thal_3526 | 34 | 104 | 1.50E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.603 |
| SRR1783600 | control | 6.458 |
| SRR1783602 | moderate drought stress | 16.268 |
| SRR1811619 | moderate drought stress | 15.973 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.030 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.813 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.772 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 58.486 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.810 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.522 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.568 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.609 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.507 |
| SRR2868004 | Drought Stress (root) | 28.246 |
| SRR2967015 | Control (root) | 28.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.617 |
| SRR9715740 | Leaf | 9.667 |
| SRR9715741 | Leaf | 16.014 |
| SRR9715739 | Root | 6.082 |
| SRR9715742 | Root | 8.474 |
| SRR9715743 | Root | 7.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.794 |
| SRR8749028 | MeJA induced 9h | 10.873 |
| SRR8749029 | MeJA induced 9h | 14.137 |
| SRR8749030 | Uninduced | 25.161 |
| SRR8749031 | Uninduced | 25.143 |
| SRR8749032 | Uninduced | 25.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.541 |
| SRR8400027 | Control - Root | 18.958 |