Gene detail information of Glyur000504s00018074 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57062.2 | 8.00E-06 | |
| NR | XP_008387397.1 | 4.04E-11 | PREDICTED: uncharacterized protein LOC103449856 [Malus domestica] |
| trEMBL | tr|A0A061EW65|A0A061EW65_THECC | 3.00E-09 | Uncharacterized protein {ECO:0000313|EMBL:EOY09051.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00504 | 46703 | 48350 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.473 |
| SRR1783600 | control | 1.048 |
| SRR1783602 | moderate drought stress | 4.120 |
| SRR1811619 | moderate drought stress | 2.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.085 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.206 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.654 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.830 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.902 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.936 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.346 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.229 |
| SRR2868004 | Drought Stress (root) | 9.686 |
| SRR2967015 | Control (root) | 10.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.002 |
| SRR9715740 | Leaf | 7.067 |
| SRR9715741 | Leaf | 5.309 |
| SRR9715739 | Root | 12.280 |
| SRR9715742 | Root | 7.192 |
| SRR9715743 | Root | 10.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.663 |
| SRR8749028 | MeJA induced 9h | 2.848 |
| SRR8749029 | MeJA induced 9h | 3.221 |
| SRR8749030 | Uninduced | 1.783 |
| SRR8749031 | Uninduced | 0.904 |
| SRR8749032 | Uninduced | 2.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.075 |
| SRR8400027 | Control - Root | 12.576 |