Gene detail information of Glyur000503s00017764 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45275.1 | 1.00E-174 | Major facilitator superfamily protein |
| NR | XP_004493015.1 | 0 | PREDICTED: uncharacterized protein LOC101507046 isoform X2 [Cicer arietinum] |
| trEMBL | tr|K7KE43|K7KE43_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G24141.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00503 | 69828 | 75898 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000503s00017764.1 | PF06813.8 | Nodulin-like | 11 | 256 | 6.00E-78 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.997 |
| SRR1783600 | control | 2.863 |
| SRR1783602 | moderate drought stress | 5.156 |
| SRR1811619 | moderate drought stress | 5.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.744 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.737 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.204 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.149 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.858 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.859 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.241 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.634 |
| SRR2868004 | Drought Stress (root) | 12.177 |
| SRR2967015 | Control (root) | 14.048 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.202 |
| SRR9715740 | Leaf | 4.765 |
| SRR9715741 | Leaf | 2.630 |
| SRR9715739 | Root | 1.510 |
| SRR9715742 | Root | 4.494 |
| SRR9715743 | Root | 2.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.966 |
| SRR8749028 | MeJA induced 9h | 8.364 |
| SRR8749029 | MeJA induced 9h | 5.351 |
| SRR8749030 | Uninduced | 3.055 |
| SRR8749031 | Uninduced | 2.284 |
| SRR8749032 | Uninduced | 1.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.928 |
| SRR8400027 | Control - Root | 8.661 |