Gene detail information of Glyur000503s00017763 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54650.1 | 1.00E-38 | Methyltransferase family protein |
| NR | XP_003536147.1 | 3.46E-76 | PREDICTED: methyltransferase-like protein 6-like [Glycine max] |
| trEMBL | tr|G7I673|G7I673_MEDTR | 5.00E-71 | Methyltransferase domain protein {ECO:0000313|EMBL:AES61180.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00503 | 66121 | 67746 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.806 |
| SRR1783600 | control | 0.739 |
| SRR1783602 | moderate drought stress | 1.499 |
| SRR1811619 | moderate drought stress | 1.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.802 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.775 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.974 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.984 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.473 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.297 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.502 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.615 |
| SRR2868004 | Drought Stress (root) | 1.136 |
| SRR2967015 | Control (root) | 0.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.367 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.314 |
| SRR9715739 | Root | 0.067 |
| SRR9715742 | Root | 0.758 |
| SRR9715743 | Root | 0.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.807 |
| SRR8749028 | MeJA induced 9h | 2.061 |
| SRR8749029 | MeJA induced 9h | 0.690 |
| SRR8749030 | Uninduced | 7.316 |
| SRR8749031 | Uninduced | 9.091 |
| SRR8749032 | Uninduced | 6.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.671 |
| SRR8400027 | Control - Root | 0.985 |