Gene detail information of Glyur000502s00019278 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12240.2 | 3.00E-21 | |
| NR | NP_001237209.1 | 1.08E-62 | uncharacterized protein LOC100527775 [Glycine max] |
| trEMBL | tr|C6T5D5|C6T5D5_SOYBN | 4.00E-63 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G44600.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00502 | 133178 | 136616 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.589 |
| SRR1783600 | control | 8.613 |
| SRR1783602 | moderate drought stress | 6.896 |
| SRR1811619 | moderate drought stress | 6.915 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.196 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.811 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.786 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.159 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.135 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.319 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.604 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.156 |
| SRR2868004 | Drought Stress (root) | 34.105 |
| SRR2967015 | Control (root) | 30.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.764 |
| SRR9715740 | Leaf | 25.187 |
| SRR9715741 | Leaf | 24.035 |
| SRR9715739 | Root | 4.677 |
| SRR9715742 | Root | 11.727 |
| SRR9715743 | Root | 9.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 96.711 |
| SRR8749028 | MeJA induced 9h | 34.989 |
| SRR8749029 | MeJA induced 9h | 82.604 |
| SRR8749030 | Uninduced | 82.026 |
| SRR8749031 | Uninduced | 77.405 |
| SRR8749032 | Uninduced | 56.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.056 |
| SRR8400027 | Control - Root | 27.236 |