Gene detail information of Glyur000502s00019267 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12490.1 | 3.00E-29 | cystatin B |
| NR | XP_004491211.1 | 1.45E-48 | PREDICTED: cysteine proteinase inhibitor-like [Cicer arietinum] |
| Swissprot | tr|Q06445|CYTI_VIGUN | 3.00E-46 | Cysteine proteinase inhibitor |
| trEMBL | tr|C6SV68|C6SV68_SOYBN | 4.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G04250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00502 | 58846 | 61677 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000502s00019267.1 | PF00031.16 | Cystatin | 5 | 92 | 9.80E-18 |
| Glyur000502s00019267.2 | PF00031.16 | Cystatin | 5 | 92 | 9.80E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.099 |
| SRR1783600 | control | 8.226 |
| SRR1783602 | moderate drought stress | 3.698 |
| SRR1811619 | moderate drought stress | 3.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.323 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.245 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.039 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.427 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.172 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.775 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 311.492 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 307.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.080 |
| SRR2868004 | Drought Stress (root) | 157.524 |
| SRR2967015 | Control (root) | 123.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 178.729 |
| SRR9715740 | Leaf | 131.767 |
| SRR9715741 | Leaf | 354.083 |
| SRR9715739 | Root | 10.316 |
| SRR9715742 | Root | 15.525 |
| SRR9715743 | Root | 13.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 214.165 |
| SRR8749028 | MeJA induced 9h | 255.022 |
| SRR8749029 | MeJA induced 9h | 744.471 |
| SRR8749030 | Uninduced | 1916.344 |
| SRR8749031 | Uninduced | 4304.507 |
| SRR8749032 | Uninduced | 3083.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.012 |
| SRR8400027 | Control - Root | 32.146 |