Gene detail

Gene detail information of Glyur000499s00027935

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G14690.2	microtubule-associated protein 65-7
NR	XP_007153034.1	hypothetical protein PHAVU_003G002000g [Phaseolus vulgaris]
Swissprot	tr\|Q9SIS3\|MA656_ARATH	65-kDa microtubule-associated protein 6
trEMBL	tr\|V7C6N2\|V7C6N2_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW25028.1}

Sequence

Transcript Sequence

>Glyur000499s00027935.1
AATATTTTCTCTCACAAAGAGAGTAAGAGTGTGTGTGTAGTGTTAGTGTAGGAAAATAAAATAACAAGCCATGTATGAGTGTTTACTTTACCCACTACAAATCATTGGCGAATGTGCACACACACTCACACAGAGAGAGAGAGCACTCATACACATAAACAGAGTAGAATACAGATCCATTCCAATACCTGCCTCTTTACCTGCTCCACTTCGCTGCTACATTTTTGGCGCATTTTAGCATCTAACTACCAAACCCTAAAAAAGCATTATCCTTATTCTTCCTTTGCCCCTTTGCTTTTGCTTAAACTTCCCTTTTAATTTTTCTCTCACTCTTTTTTTTTGGCTCTTAATGCACCAATCTTCAACAATAATAATCATGGCAATCATTTTCTCCCCCTGAAAACACCCCCACTCTCCCTCTCTTTACAGATCCTGTGTCATTTCTTTCTCAGAAACTTCCTTCTTTGTGTAGTTTGGTTGAAGAGAGAAAGAGAGAGAGAGAGAGACCACCCAACCAAAGGTTTCAGCTTTAGATCTGGGGGGAGCTTAGGTTGTTTGAAAAAATGGAGATACCCCATGTCTCTTGGTCTTTGACTTGAAAATTTCTTGCTTTCTTTTGTATTGTTTTGGAGTTTTAAGAAAGAGGGTGTAGCTAGCAGCAGCAGCACTGCTAGAGTGACCTTTGAGATTTTAACACTACCTTCAGATTTTTGTGAATAATAATGATGCTGGCCATTGGGAGTCCTACCACCATTAGTATCCGTACAAGTACTACTTGCACTGCTTTGCTCAGAGAACTCGAGCAAATATGGAGCGATATTGGGGAGAGCGAGGTGGACAAGGACCGAATGTTGATGGAACTGGAGAGGGAATGCTTAGAGGTTTACAGGAGAAAGGTTGATGAGGCTGCCAACACCAAAGCACGCTTTCATCAGACTGTTGCTGCCAAGGAAGCTGAGCTTGCAACACTAGTGGCTGCCCTTGGCGAACACGATGTTCATTCACCGATTAAGACAGAGAAGAGATCTGCATCCCTGAAGGAGAAACTTGCATCTGTCACACCACTGGTTGAAGAATTGAAGAAGAAAAAAGATGAAAGGTTGAAGCAATTTGCAGATATAAAAGCTCAAATAGAAAAGATAAGTGGAGAGATTTGTGGAATCCATCCTGTCAATGATGCTACAAGCAGCACAGACGTTGCAGAGGAACAAGACTTGTCACTTAGAAGACTTAATGAATATCAAACACATCTTCGTAGTCTTCAAAAGGAAAAGTCTGACCGCCTTCAAAAGGTCTTGCAATGTGTGAATGAGGTGCATTCTNTCTGTGGTGTTCTTGGGTTGGATTTTGGCCAAACTGTGGGTGATGTGCATCCAAGCTTGCATGGGACTCAGGTGGAACAATCGACTAATATTAGCAATAGCACGTTGGAAGGTCTAGAGCAGACCATTCTCAAGTTAAAAACAGAAAGGAAAACTAGAATCCAGAAGCTGAAGGATGTCGTTTCTAAACTATTTGAACTTTGGAATTTGATGGACTCATCAAAAGAAGAGAGAAACTGTTTTCTGAGGATTACTTCCATTGTTGGAACTTCAGAATCAGAAATCACCGAGCGAGGCGTTCTTTCAACAGAGATGATAGAGAAGGCTTCAGAAGAAGTGGAAAGGCTTTCCAAGCTAAAAGCAAGCAGAATGAAGGAGCTTGTTTTTAAGAAGAGGTCAGAGTTGGAGGAAATATGTAGACTGACTCATATTGAACCTGATACAAGTACTGCTGCTGAGAAAGCTAGTGCATTAATAGATTCTGGCCTGGTTGATCCTTCTGAACTATTAGCTAACATTGAAGCACAGATAGTGAAGGCAAAAGATGAAGCTTTGAGCAGAAGAGAAGTAACAGATAGGNTTGATAAGTGGCTTTCTGCATGTGAAGAGGAGAATTGGCTTGACGAATATAATCAAGATGAAAATCGGTACAGTGCTGGGCGAGGTGCTCACATCAATCTTAAACGTGCAGAACGAGCTAGAGTAACTGTAACCAAAATTCCAGCTATGGTTGACAATCTTATCAACAAAACACTAGCCTGGGAAGATGAAAAGAAGACTCATTTTCTATATGATGGGGTACGTTTGGTGTCAATATTGGAGGATTATAAACTGACTAGACAACAGAGGGAAGAAGAGAAGAGACGACACAGGGACCAAAAGAAGCTGCAAGATCTACTCCTAAACCAAAAGGAAGCCATGTATGGTTCTAAACCTAGTCCAAGAAAAAGTAACAGCTTTAGAAAGACAAATGGGTATCGTGCAAACGGCAATGGAAATGGCTATGGCAATGGATCCATGCCTCCCACGCCTCGCCGTAACTCAGTAAGTGGTGGAACATCTGAATTACATACGCCACGTTCCTACTCTGGCCGTCATAATGGATATTTCCAGGAAGTGAGAAGATTGTCTACTGCACCTCTGAACTTTGTGGCTATATCTAAGGAAGATACAATGTCATTTACTTCTCTTTGTGGTTCAGAGCCTGAATCCCCTCCCCAAGTTTAAACTTCAAAAAACAAAAATGGAATAGGCTATTAGAGATTTTCTTGGGCAGTGTCTGTAAACATTATTGAAACCAGCGCAAACCTTGTGAATATGAGATGGGATTGTACACTAGTATTTGCTTGTAATAAGCTGAGGTATATACCTGAACAGTGATAGCTGCTGACATTTGAGGACAGGAATTTAGGGGTGTTTATGCTTTTGAAGAACATATCNGCTTTTGGGAAATGTTGATACTAGTACTAGTACTACTGGTAGGGACAGTTAAGGGGGACTCCTTTGTAGCGGGTAAAAAACAGTGAAAGATCATCATGCAGTGTTTGACCATGTATTTTGTGGGTTTTTGTTTGTTTTCCTTGTGTTAAGTTGTATATAATGTTCAGTGTGAGATGGGTCATCATTTTCATGTAGTAACTAGTAACTAAGATTATTTTGATTCATAATTGTAGGAAAGTTGATGCTATAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00499	146197	153026	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0000226 microtubule cytoskeleton organization

GO:0000910 cytokinesis

molecular_function
GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000499s00027935.1	PF03999.7	MAP65_ASE1	40	518	3.50E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	79.509
SRR1783600	control	79.771
SRR1783602	moderate drought stress	91.421
SRR1811619	moderate drought stress	90.427

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	119.375
DRR006520	Root Summer glycyrrhizin high producing strain	118.624
DRR006521	Root Winter glycyrrhizin high producing strain	15.040
DRR006522	Root Winter glycyrrhizin high producing strain	14.373
DRR006523	Root Summer glycyrrhizin low producing strain	110.797
DRR006524	Root Summer glycyrrhizin low producing strain	110.124
DRR006525	Leaf Summer glycyrrhizin high producing strain	31.662
DRR006526	Leaf Summer glycyrrhizin high producing strain	31.377

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	96.651
SRR2868004	Drought Stress (root)	101.176
SRR2967015	Control (root)	106.850

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	24.307
SRR9715740	Leaf	19.795
SRR9715741	Leaf	24.814
SRR9715739	Root	7.867
SRR9715742	Root	56.370
SRR9715743	Root	48.342

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	52.177
SRR8749028	MeJA induced 9h	38.750
SRR8749029	MeJA induced 9h	27.845
SRR8749030	Uninduced	11.443
SRR8749031	Uninduced	7.635
SRR8749032	Uninduced	7.721

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	149.692
SRR8400027	Control - Root	167.137