Gene detail information of Glyur000499s00027932 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79190.1 | 2.00E-65 | ARM repeat superfamily protein |
| NR | XP_003589753.1 | 4.13E-119 | Tel2-interacting protein [Medicago truncatula] |
| trEMBL | tr|G7IBH0|G7IBH0_MEDTR | 2.00E-119 | ARM repeat protein {ECO:0000313|EMBL:AES60004.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00499 | 116688 | 119961 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.998 |
| SRR1783600 | control | 2.490 |
| SRR1783602 | moderate drought stress | 3.766 |
| SRR1811619 | moderate drought stress | 3.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.912 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.010 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.361 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.897 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.786 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.595 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.780 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.592 |
| SRR2868004 | Drought Stress (root) | 16.034 |
| SRR2967015 | Control (root) | 20.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.667 |
| SRR9715740 | Leaf | 3.317 |
| SRR9715741 | Leaf | 4.446 |
| SRR9715739 | Root | 2.599 |
| SRR9715742 | Root | 11.259 |
| SRR9715743 | Root | 11.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.718 |
| SRR8749028 | MeJA induced 9h | 8.941 |
| SRR8749029 | MeJA induced 9h | 2.143 |
| SRR8749030 | Uninduced | 0.853 |
| SRR8749031 | Uninduced | 0.969 |
| SRR8749032 | Uninduced | 0.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.409 |
| SRR8400027 | Control - Root | 16.448 |