Gene detail information of Glyur000498s00016164 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51510.1 | 4.00E-18 | |
| NR | XP_004516724.1 | 1.57E-94 | PREDICTED: uncharacterized protein LOC101503943 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G8A2G4|G8A2G4_MEDTR | 4.00E-79 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH35000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00498 | 108956 | 112237 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000498s00016164.1 | PF07086.7 | DUF1352 | 10 | 52 | 7.00E-05 |
| Glyur000498s00016164.3 | PF07086.7 | DUF1352 | 10 | 52 | 3.60E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.285 |
| SRR1783600 | control | 6.110 |
| SRR1783602 | moderate drought stress | 6.385 |
| SRR1811619 | moderate drought stress | 6.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.803 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.179 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.447 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.460 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.120 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.634 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.001 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.835 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.436 |
| SRR2868004 | Drought Stress (root) | 7.852 |
| SRR2967015 | Control (root) | 7.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.445 |
| SRR9715740 | Leaf | 2.985 |
| SRR9715741 | Leaf | 3.701 |
| SRR9715739 | Root | 2.428 |
| SRR9715742 | Root | 2.232 |
| SRR9715743 | Root | 2.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.679 |
| SRR8749028 | MeJA induced 9h | 9.911 |
| SRR8749029 | MeJA induced 9h | 12.602 |
| SRR8749030 | Uninduced | 10.108 |
| SRR8749031 | Uninduced | 2.871 |
| SRR8749032 | Uninduced | 5.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.435 |
| SRR8400027 | Control - Root | 10.558 |