Gene detail information of Glyur000497s00020202 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62570.2 | 5.00E-113 | Calmodulin binding protein-like |
| NR | XP_004508839.1 | 0 | PREDICTED: uncharacterized protein LOC101513422 [Cicer arietinum] |
| trEMBL | tr|G7JNV1|G7JNV1_MEDTR | 0 | Calmodulin-binding protein {ECO:0000313|EMBL:AES91154.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00497 | 132693 | 137406 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000497s00020202.1 | PF07887.6 | Calmodulin_bind | 53 | 339 | 1.60E-107 |
| Glyur000497s00020202.2 | PF07887.6 | Calmodulin_bind | 83 | 369 | 1.80E-107 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.359 |
| SRR1783600 | control | 14.413 |
| SRR1783602 | moderate drought stress | 18.218 |
| SRR1811619 | moderate drought stress | 18.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.676 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.677 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.402 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.856 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.477 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.109 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.354 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.278 |
| SRR2868004 | Drought Stress (root) | 12.119 |
| SRR2967015 | Control (root) | 8.932 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 68.126 |
| SRR9715740 | Leaf | 48.524 |
| SRR9715741 | Leaf | 87.948 |
| SRR9715739 | Root | 8.879 |
| SRR9715742 | Root | 25.550 |
| SRR9715743 | Root | 21.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.834 |
| SRR8749028 | MeJA induced 9h | 25.386 |
| SRR8749029 | MeJA induced 9h | 11.951 |
| SRR8749030 | Uninduced | 12.539 |
| SRR8749031 | Uninduced | 4.540 |
| SRR8749032 | Uninduced | 3.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.538 |
| SRR8400027 | Control - Root | 25.621 |