Gene detail information of Glyur000497s00020191 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G40240.1 | 3.00E-67 | nodulin MtN21 /EamA-like transporter family protein |
| NR | XP_003608949.1 | 0 | Auxin-induced protein 5NG4 [Medicago truncatula] |
| Swissprot | tr|Q9FL08|WTR42_ARATH | 3.00E-90 | WAT1-related protein At5g40240 |
| trEMBL | tr|G7JNU3|G7JNU3_MEDTR | 0 | Nodulin MtN21/EamA-like transporter family protein {ECO:0000313|EMBL:AES91146.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00497 | 69564 | 72417 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000497s00020191.1 | PF00892.15 | EamA | 28 | 159 | 3.80E-11 |
| Glyur000497s00020191.1 | PF00892.15 | EamA | 209 | 330 | 7.80E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.667 |
| SRR1783600 | control | 4.735 |
| SRR1783602 | moderate drought stress | 3.728 |
| SRR1811619 | moderate drought stress | 3.655 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.545 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.343 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.059 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.950 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.526 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.200 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.522 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 27.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.980 |
| SRR2868004 | Drought Stress (root) | 2.683 |
| SRR2967015 | Control (root) | 1.847 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.807 |
| SRR9715740 | Leaf | 25.103 |
| SRR9715741 | Leaf | 21.012 |
| SRR9715739 | Root | 1.554 |
| SRR9715742 | Root | 5.489 |
| SRR9715743 | Root | 5.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.208 |
| SRR8749028 | MeJA induced 9h | 1.743 |
| SRR8749029 | MeJA induced 9h | 2.460 |
| SRR8749030 | Uninduced | 1.667 |
| SRR8749031 | Uninduced | 0.439 |
| SRR8749032 | Uninduced | 1.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.888 |
| SRR8400027 | Control - Root | 3.073 |