Gene detail information of Glyur000496s00030948 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55160.1 | 0 | |
| NR | XP_004489387.1 | 0 | PREDICTED: thyroid adenoma-associated protein homolog [Cicer arietinum] |
| trEMBL | tr|A0A072U7B4|A0A072U7B4_MEDTR | 0 | Death receptor interacting protein, putative {ECO:0000313|EMBL:KEH24998.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00496 | 42667 | 50796 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000496s00030948.1 | PF10350.4 | DUF2428 | 1075 | 1406 | 1.20E-75 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.481 |
| SRR1783600 | control | 2.398 |
| SRR1783602 | moderate drought stress | 3.904 |
| SRR1811619 | moderate drought stress | 3.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.565 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.552 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.486 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.489 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.852 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.769 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.566 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.829 |
| SRR2868004 | Drought Stress (root) | 7.740 |
| SRR2967015 | Control (root) | 7.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.476 |
| SRR9715740 | Leaf | 2.299 |
| SRR9715741 | Leaf | 2.260 |
| SRR9715739 | Root | 1.423 |
| SRR9715742 | Root | 5.346 |
| SRR9715743 | Root | 4.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.481 |
| SRR8749028 | MeJA induced 9h | 3.125 |
| SRR8749029 | MeJA induced 9h | 1.587 |
| SRR8749030 | Uninduced | 1.177 |
| SRR8749031 | Uninduced | 0.774 |
| SRR8749032 | Uninduced | 0.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.559 |
| SRR8400027 | Control - Root | 4.465 |