Gene detail

Gene detail information of Glyur000495s00023453

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G54700.1	0	phosphate transporter 1;7
NR	AGH28094.1	0	phosphate transporter 1 [Stylosanthes guianensis]
COG	NP_344489.1	5.00E-87	phosphate transporter [Sulfolobus solfataricus P2]
Swissprot	tr\|Q494P0\|PHT17_ARATH	0	Probable inorganic phosphate transporter 1-7
trEMBL	tr\|U3LP59\|U3LP59_9FABA	0	Phosphate transporter 1 {ECO:0000313\|EMBL:AGH28094.1}

Sequence

Transcript Sequence

>Glyur000495s00023453.1
ATGGCTAGAGAACTAGGAGTGCTGAATGCACTCGATGTGGCAAAGACACAATGGTACCACTTCACAGCAATTGTGATAGCTGGGATGGGTTTCTTCACAGATGCCTATGATCTCTTCTGCATTTCCCTTGTCACCAAGTTGTTGGGTCGGATATACTACACAGACACAAATGCACCAAAGCCGGGAACACTTCCCCCTAATGTTCAAGCTGCTGTGACTGGTGTTGCACTGGTTGGGACATTAGCAGGCCAACTATTCTTTGGTTGGCTTGGCGACAAAATGGGAAGGAAAAGGGTCTATGGTTTGACCCTTATTCTCATGGTGGTTTGTTCAGTTGCCTCAGGTCTCTCTTTTGGATCAAGTGCAAAGGGTGTGATGGCCACACTTTGTTTCTTCAGGTTCTGGCTTGGTTTTGGGATTGGTGGTGACTACCCTCTTTCGGCCACAATCATGTCCGAATACGCGAACAAAAAGACTCGCGGCGCGTTCATAGCCGCGGTGTTTGCCATGCAAGGATTTGGAATCATGGCTGGTGGAATTGTTGCCTTGATTGTCTCATCTGCATATGACCACAAATATAAAGTCCCTACTTATGAAGAGAATCCAGGGGCATCATTGGTACTTCCTGCATTCGACTATGTTTGGCGCATTGTTCTAATGTTTGGTGCTCTCCCAGCTGCACTCACATACTATTGGCGTATGAAGATGCCGGAAACAGCGCGCTACACAGCGCTTGTTGCCAAGAATGCAAAACAAGCTGCAGCAGACATGTCTAAGGTGTTGAATGTTGAGCTTGAAGCCGAGGAGGAAAAAGTGAAGAAGATCGCTGATTCCGGTAGCAACAAGTATGGCTTGTTCAGCAAGGAATTTGCCAAGCGCCACGGGCTCCACTTGGTTGGGACTACCACAACTTGGTTCTTGTTGGACATAGCATTCTATAGCCAGAACCTTTTCCAGAAGGACATTTTCACCGCGATTGGGTGGATCCCTCCGGCGCAGGAGATGAATGCAATCCATGAGGTTTACAAAATTGCAAGAGCACAAACACTTATAGCTCTTTGCAGCACCGTGCCAGGTTACTGGTTCACCGTGGCATTCATAGACTACATGGGCCGATTCGCGATCCAATTGATGGGTTTCATCTTCATGACTATCTTCATGTTTGCTCTGGCAATACCATATGATCACTGGACCAAGAAGGACAACAGGATTGGGTTTGTTGTGATATACTCACTCACTTTCTTCTTCGCGAATTTTGGTCCGAACGCAACCACATTCGTTGTGCCGGCTGAGATCTTCCCAGCTAGGCTAAGGTCTACTTGTCATGGGATCTCAGCTGCTGCTGGAAAAGCAGGAGCAATTGTGGGTGCATTTGGGTTCTTGTATGCTGCACAGAGTAAGGACCCTCTTAAGACTGATAAAGGGTACCCAACTGGGATTGGGATTAAGAACTCACTCATTATGCTTGGTGTGATCAACTTGGCTGGGGTGTTCTTCACCTTGCTGGTTCCTGAATCAAAGGGGAAATCATTGGAGGAGTTGAGTGGAGAGAATGAAGATGGAGATGGTGCTGAGGCTATTGAGCAAGCAGGATCTGCTAGGACAGTTCCAGTTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00495	9550	11166	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006817 phosphate ion transport

GO:0055085 transmembrane transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0005315 inorganic phosphate transmembrane transporter activity

GO:0022857 transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000495s00023453.1	PF00083.19	Sugar_tr	25	515	2.00E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.328
SRR1783600	control	0.348
SRR1783602	moderate drought stress	0.134
SRR1811619	moderate drought stress	0.112

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.067
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.052
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	86.026
SRR2868004	Drought Stress (root)	61.748
SRR2967015	Control (root)	103.548

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.040
SRR9715740	Leaf	0.000
SRR9715741	Leaf	0.000
SRR9715739	Root	0.000
SRR9715742	Root	0.653
SRR9715743	Root	0.645

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.011
SRR8749028	MeJA induced 9h	0.351
SRR8749029	MeJA induced 9h	0.075
SRR8749030	Uninduced	0.118
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.033

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	67.774
SRR8400027	Control - Root	49.535