Gene detail information of Glyur000494s00017400 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28430.1 | 6.00E-13 | |
| NR | KEH30049.1 | 1.25E-42 | zinc finger, C3HC4 type family protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072UJW8|A0A072UJW8_MEDTR | 5.00E-43 | Zinc finger, C3HC4 type family protein, putative {ECO:0000313|EMBL:KEH30049.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00494 | 69871 | 71334 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.389 |
| SRR1783600 | control | 9.682 |
| SRR1783602 | moderate drought stress | 7.727 |
| SRR1811619 | moderate drought stress | 7.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.239 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.696 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.660 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.357 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.832 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.416 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.723 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 54.195 |
| SRR2868004 | Drought Stress (root) | 41.464 |
| SRR2967015 | Control (root) | 29.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.105 |
| SRR9715740 | Leaf | 22.959 |
| SRR9715741 | Leaf | 16.498 |
| SRR9715739 | Root | 10.236 |
| SRR9715742 | Root | 9.651 |
| SRR9715743 | Root | 8.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 38.637 |
| SRR8749028 | MeJA induced 9h | 12.152 |
| SRR8749029 | MeJA induced 9h | 27.692 |
| SRR8749030 | Uninduced | 15.833 |
| SRR8749031 | Uninduced | 14.745 |
| SRR8749032 | Uninduced | 12.952 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.356 |
| SRR8400027 | Control - Root | 33.321 |