Gene detail information of Glyur000494s00017399 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28410.1 | 1.00E-11 | |
| NR | AFK34913.1 | 4.00E-66 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S3S1|I3S3S1_LOTJA | 1.00E-66 | Uncharacterized protein {ECO:0000313|EMBL:AFK34913.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00494 | 68570 | 68980 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.623 |
| SRR1783600 | control | 1.478 |
| SRR1783602 | moderate drought stress | 1.824 |
| SRR1811619 | moderate drought stress | 1.777 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.681 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.950 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.350 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.530 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.594 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.079 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.457 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.692 |
| SRR2868004 | Drought Stress (root) | 9.311 |
| SRR2967015 | Control (root) | 7.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.083 |
| SRR9715740 | Leaf | 0.003 |
| SRR9715741 | Leaf | 0.546 |
| SRR9715739 | Root | 0.436 |
| SRR9715742 | Root | 3.580 |
| SRR9715743 | Root | 3.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.543 |
| SRR8749028 | MeJA induced 9h | 0.994 |
| SRR8749029 | MeJA induced 9h | 3.808 |
| SRR8749030 | Uninduced | 2.615 |
| SRR8749031 | Uninduced | 4.755 |
| SRR8749032 | Uninduced | 4.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.419 |
| SRR8400027 | Control - Root | 8.553 |