Gene detail information of Glyur000494s00017395 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G45210.1 | 2.00E-21 | Protein of unknown function, DUF584 |
| NR | ACJ83912.1 | 1.14E-54 | unknown [Medicago truncatula] |
| trEMBL | tr|B7FGN3|B7FGN3_MEDTR | 4.00E-55 | Putative uncharacterized protein {ECO:0000313|EMBL:ACJ83912.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00494 | 54351 | 55408 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000494s00017395.1 | PF04520.8 | Senescence_reg | 60 | 163 | 2.00E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.673 |
| SRR1783600 | control | 1.690 |
| SRR1783602 | moderate drought stress | 5.853 |
| SRR1811619 | moderate drought stress | 6.238 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.918 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.877 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.633 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.607 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.589 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.652 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.778 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.489 |
| SRR2868004 | Drought Stress (root) | 14.348 |
| SRR2967015 | Control (root) | 17.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.302 |
| SRR9715740 | Leaf | 20.639 |
| SRR9715741 | Leaf | 22.552 |
| SRR9715739 | Root | 4.144 |
| SRR9715742 | Root | 11.367 |
| SRR9715743 | Root | 10.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.406 |
| SRR8749028 | MeJA induced 9h | 3.007 |
| SRR8749029 | MeJA induced 9h | 0.947 |
| SRR8749030 | Uninduced | 0.108 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.268 |
| SRR8400027 | Control - Root | 1.892 |