Gene detail information of Glyur000492s00023519 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67470.1 | 2.00E-176 | formin homolog 6 |
| NR | XP_004509068.1 | 0 | PREDICTED: formin-like protein 6-like [Cicer arietinum] |
| Swissprot | tr|Q9FJX6|FH6_ARATH | 0 | Formin-like protein 6 (Precursor) |
| trEMBL | tr|I1MVM1|I1MVM1_SOYBN | 0 | Formin-like protein {ECO:0000256|RuleBase:RU361260} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00492 | 104999 | 109534 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000492s00023519.1 | PF02181.18 | FH2 | 457 | 851 | 2.50E-115 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.007 |
| SRR1783600 | control | 2.047 |
| SRR1783602 | moderate drought stress | 2.726 |
| SRR1811619 | moderate drought stress | 2.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.430 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.199 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.134 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.139 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.641 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.411 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.765 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.842 |
| SRR2868004 | Drought Stress (root) | 5.862 |
| SRR2967015 | Control (root) | 6.453 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.468 |
| SRR9715740 | Leaf | 2.074 |
| SRR9715741 | Leaf | 1.446 |
| SRR9715739 | Root | 0.744 |
| SRR9715742 | Root | 5.602 |
| SRR9715743 | Root | 4.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.589 |
| SRR8749028 | MeJA induced 9h | 0.107 |
| SRR8749029 | MeJA induced 9h | 0.103 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.384 |
| SRR8400027 | Control - Root | 10.466 |