Gene detail information of Glyur000491s00023710 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49780.1 | 8.00E-14 | phytosulfokine 4 precursor |
| NR | XP_004511809.1 | 6.60E-36 | PREDICTED: phytosulfokines 3-like [Cicer arietinum] |
| Swissprot | tr|Q9M2Y0|PSK3_ARATH | 2.00E-17 | Phytosulfokine-beta (Precursor) |
| trEMBL | tr|C6TKG2|C6TKG2_SOYBN | 6.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G04930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00491 | 133550 | 134296 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000491s00023710.1 | PF06404.7 | PSK | 12 | 77 | 5.90E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.095 |
| SRR1783600 | control | 0.120 |
| SRR1783602 | moderate drought stress | 0.124 |
| SRR1811619 | moderate drought stress | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.351 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.348 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.288 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.290 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.609 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.415 |
| SRR2868004 | Drought Stress (root) | 0.402 |
| SRR2967015 | Control (root) | 0.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.254 |
| SRR9715740 | Leaf | 53.719 |
| SRR9715741 | Leaf | 38.668 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.092 |
| SRR9715743 | Root | 0.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.076 |
| SRR8749028 | MeJA induced 9h | 2.146 |
| SRR8749029 | MeJA induced 9h | 2.021 |
| SRR8749030 | Uninduced | 0.832 |
| SRR8749031 | Uninduced | 0.423 |
| SRR8749032 | Uninduced | 0.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.848 |
| SRR8400027 | Control - Root | 0.798 |