Gene detail information of Glyur000491s00023699 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09925.1 | 4.00E-42 | Pollen Ole e 1 allergen and extensin family protein |
| NR | NP_001237310.1 | 1.59E-92 | uncharacterized protein LOC100527270 precursor [Glycine max] |
| trEMBL | tr|C6T3U0|C6T3U0_SOYBN | 6.00E-93 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G37240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00491 | 43094 | 43735 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000491s00023699.1 | PF01190.12 | Pollen_Ole_e_I | 34 | 131 | 1.70E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.057 |
| SRR1783600 | control | 0.101 |
| SRR1783602 | moderate drought stress | 0.018 |
| SRR1811619 | moderate drought stress | 0.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.463 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.315 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.202 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.392 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 50.356 |
| SRR2868004 | Drought Stress (root) | 71.605 |
| SRR2967015 | Control (root) | 57.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.898 |
| SRR8749028 | MeJA induced 9h | 2.125 |
| SRR8749029 | MeJA induced 9h | 1.320 |
| SRR8749030 | Uninduced | 0.721 |
| SRR8749031 | Uninduced | 0.707 |
| SRR8749032 | Uninduced | 0.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.907 |
| SRR8400027 | Control - Root | 3.643 |