Gene detail information of Glyur000491s00023697 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67620.1 | 2.00E-34 | |
| NR | XP_003608539.1 | 1.17E-70 | hypothetical protein MTR_4g097220 [Medicago truncatula] |
| trEMBL | tr|G7JF67|G7JF67_MEDTR | 4.00E-71 | Uncharacterized protein {ECO:0000313|EMBL:AFK45573.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00491 | 34918 | 37163 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000491s00023697.1 | PF14009.1 | DUF4228 | 1 | 167 | 2.20E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.764 |
| SRR1783600 | control | 34.970 |
| SRR1783602 | moderate drought stress | 23.374 |
| SRR1811619 | moderate drought stress | 22.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.391 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.012 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.718 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.696 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.821 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.140 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.704 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.720 |
| SRR2868004 | Drought Stress (root) | 9.957 |
| SRR2967015 | Control (root) | 3.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.871 |
| SRR9715740 | Leaf | 3.795 |
| SRR9715741 | Leaf | 2.482 |
| SRR9715739 | Root | 16.972 |
| SRR9715742 | Root | 25.098 |
| SRR9715743 | Root | 20.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.507 |
| SRR8749028 | MeJA induced 9h | 14.115 |
| SRR8749029 | MeJA induced 9h | 23.526 |
| SRR8749030 | Uninduced | 13.376 |
| SRR8749031 | Uninduced | 19.487 |
| SRR8749032 | Uninduced | 8.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.742 |
| SRR8400027 | Control - Root | 37.220 |