Gene detail

Gene detail information of Glyur000491s00023694.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G37670.2	0	N-acetyl-l-glutamate synthase 2
NR	XP_004511825.1	0	PREDICTED: amino-acid acetyltransferase-like isoform X1 [Cicer arietinum]
COG	YP_007504331.1	4.00E-69	N-acetylglutamate synthase [Morganella morganii subsp. morganii KT]
Swissprot	tr\|B5X4Z4\|NAGS2_ARATH	0	Probable amino-acid acetyltransferase NAGS2, chloroplastic (Precursor)
trEMBL	tr\|V7CEZ9\|V7CEZ9_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW28699.1}

Sequence

Transcript Sequence

>Glyur000491s00023694.1
ATGGCCTCTTCCTTATCGTGTTCTTTCATGTTCCTTCCTCCAAACCCTCCCAAGTTTCATGCTTCCAATGAACTGCGTTGTTCTCCTCACCAGTTCTGTTTCCCCCCACAACAAGCGAAGCTTCAATTCAAACCTCGTTCCCCAGAAACGTGGGCTTTGGGGGCCCACTTGGGTAACCGAAAGAAGGGAACACTATCAACAACGTGTAATGTGTTGAGCGATGGAGTGAACGGAATAAGCTTGGAAGAAGAAGAGAGCTACAATAATAATAGCAGCTCCTCCATGGAGGACAAACAATTCGTGCGTTCGTTTCGTGAGGCGTGGCCTTACTTGTGGGCCTATCGAGGAAGCACCTTCGTTGTCATCATTTCCGGTGAAATTGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTACAAATAGACAAGCTTTTGACTGAGAGAGGGAGCAAGCCTAAGTATGTTGGTAGATATAGAATAACTGATGATGAATCTCTAGAAGCTGCAATGGAAGCAGCTGGGGGAATTAGATTGATGATTGAAGCAAAGCTTTCTCCTGGACCTTCCATATGCAATATTCGTAGGCATGGTGACAATAGTCGTTGGCACGATGTTGGTGTCAGTGTTGCCAGCGGTAACTTNCTTGCTGCCAAGAGAAGAGGGGTGGTCAGTGGAATTGATTTTGGGGCAACTGGGGAAGTTAAAAAAGTAGACGCATCTCGCATGCGTGAGAGGCTTGATGGTGGTTGTATAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTGAATTGCAACACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCGGACAAGCTAATATGCATTATAGATGGTCCGATACTTGATGAGAATGGACGCCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGTTAATTCGTAAAAGGGCTGAGCAAAGTGAAACAGCTGCTAACTATGTGAAAGCTATTGACGAAGAAGGTTTCAATTCTGTTGAGCATAACAATAACAATTTTAATGGGGCTGTCAATGGGAAACGCTTCACAGAATGGCATAATGCAACTTTCCATAATGGTGTTGGTTTTGAGAATGGAAATGGCTTAGAGGCTGGTGAGCAAGGTTTTGCTATTGGAGGTCAAGAGCGGCTAAGTCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCTTTTGTTTGCAGAGGCGGGGTTCAAAGAGTTCACTTGTTGGATGGNACTATTAGTGGAGTTCTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGATCTTTATGAAGGCACTCGAATGGCACAGAGAAAAGATTTTTCTGGAATAAAGCAAATTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAACGGACCGATGAAGAGCTGCTAGAAANTTTGAATAATTTCGTTATTGTGGAAAGAGAAGGTCAAATAATTGCTTGTGGTGCCCTTATTCCTTACTTTGAGGAGAAGTGTGGAGAGATTGCTTCTATTGCAGTGTCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCATCATCTCTTGGATTGGATACGCTTTTCCTGCTTACAACACGTACAGCAGACTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAGAGGAAAATGATCAATCTGTCCCGCAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAGAAGTGGAATTACTGTTGGTGGAAAATTAGTTTCGAATTAGTGCTATTTTATTTTACTTTTGTTTTCCATCTACAACGGGTGAAGGGTGATTGGAGGCAATGTGTTAGGCACTTCTGTAGAATATAGAGAATAATCTCGTAGCAATATGGTAGCTGGGATGATCAGTATTTCTGACAGGTCTTCCGCATGTACCATTAAGTTTACCATTGTTAATTTATCTTTGGTCTTTTTTTTTTTTGGTCGAAAAATTTATCTTTGGTATTTAATTTCCACATTTTGAGGGTTTATTCCCCTCTTGCCCACAATTCAAATAAGAGAACCCATGAACCGGGAGACGAACCAAACTCTTCATCAAATTTGGGTGGGCCTTACTATTCAAAAAAAAAAAAACCACTTGAAGTTGACTGCATCATAACCTGCAACTACAGGTTGCTGTTGACAGGGCTGTTAAGGGTAGATGCACATGCATCTTCTAGCAATTGATTGTCATNATAAAGATCTTATTCTGGCTTAGAAAAGCAGCAACTTTCTTTTTAACAGATTTCTTTGTGAGTATGATTAGCTTGCACCAAACATGTGATAGTTTTAAGTCACCGAAAACAATGAAGAATGATTCTTTTTCGTAGTAACGAAAACAACATTAATCACTTTCTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00491	10464	15237	-

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14682	argAB	EC:2.3.1.1	2-Oxocarboxylic acid metabolism	map01210
			Biosynthesis of amino acids	map01230
			Arginine biosynthesis	map00220

Gene Ontology

biological_process
GO:0006526 arginine biosynthetic process

cellular_component
GO:0005737 cytoplasm

molecular_function

GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity

GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000491s00023694.1	PF00696.23	AA_kinase	129	328	9.70E-10
Glyur000491s00023694.1	PF00583.19	Acetyltransf_1	498	563	1.10E-11

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	27.215
SRR1783600	control	27.266
SRR1783602	moderate drought stress	30.693
SRR1811619	moderate drought stress	29.927

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	21.933
DRR006520	Root Summer glycyrrhizin high producing strain	21.660
DRR006521	Root Winter glycyrrhizin high producing strain	62.841
DRR006522	Root Winter glycyrrhizin high producing strain	60.538
DRR006523	Root Summer glycyrrhizin low producing strain	27.520
DRR006524	Root Summer glycyrrhizin low producing strain	27.835
DRR006525	Leaf Summer glycyrrhizin high producing strain	38.137
DRR006526	Leaf Summer glycyrrhizin high producing strain	37.941

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	19.633
SRR2868004	Drought Stress (root)	29.843
SRR2967015	Control (root)	32.630

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	50.562
SRR9715740	Leaf	95.052
SRR9715741	Leaf	61.941
SRR9715739	Root	12.311
SRR9715742	Root	28.413
SRR9715743	Root	24.979

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.332
SRR8749028	MeJA induced 9h	12.984
SRR8749029	MeJA induced 9h	10.061
SRR8749030	Uninduced	17.887
SRR8749031	Uninduced	35.330
SRR8749032	Uninduced	15.480

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.210
SRR8400027	Control - Root	29.620