Gene detail

Gene detail information of Glyur000490s00023913.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G47450.2	1.00E-178	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	XP_004506351.1	0	PREDICTED: NO-associated protein 1, chloroplastic/mitochondrial-like [Cicer arietinum]
COG	YP_004642587.1	2.00E-46	hypothetical protein KNP414_04185 [Paenibacillus mucilaginosus KNP414]
Swissprot	tr\|Q66GP9\|NOA1_ARATH	0	NO-associated protein 1, chloroplastic/mitochondrial (Precursor)
trEMBL	tr\|G7IGS4\|G7IGS4_MEDTR	0	Nitric oxide synthase-associated protein {ECO:0000313\|EMBL:AES66002.1}

Sequence

Transcript Sequence

>Glyur000490s00023913.1
ATGGCGCTTAAAACCCTATCCACTTTTCTCTCACCTCTTTCCTTCCCAANCCCCAAATTCCCCCAACGCCACACCAAACCTTGCCTCATTCTATGCGAATTCCAACGTCCTCCGAAATCGCGTTTGCCCGCCGCCGAATCGGANGGCACCGGCGCCGCTGCTCCGTCGCCGGGCGAGAAGTTCCTCGAACGCCAGCAGTTATTCGAGGCTTCCAAACTCATCCTCAAGGAGAACAACAACAACAAGAAGAATAATAAAAAGAAAGAGAAGCCTCTTAAACCTTCTAATACCATCACCTCCTGCTACGGTTGCGGCGCTCCAAGAAGAAACATCACCAGCTTAGAACCGCGGTGCCGGCTTTTGTCTCATGGCAAGATGATAACTGCTGTTGGAGGACACGGAGGATACCCCGGCGGCAAACAGTTCNTAACGGCGGAAGAGCTTCGACAGAAGTTGTCTCACTTGCGTCACTCCAAAGCTCTAATTGTCAAATTGGTTGATATTGTTGACTTCAATGGCAGCTTTTTGTCTCGTGTGCGAGATCTTGCTGGTGCTAATCCAATAATATTGGTGGTGACTAAGGTTGATCTTCTTCCGAGAGATACTGATCTTAATTGTATGGGGGATTGGGTTGTAGAGGCTATCACAAGAAAAAAGCTGAATGTTCTCAGTGTCCATCTGACCAGTTCAAAATCATTGGTTGGAATAACTGGAGTGATATCAGAAATCCAGAAAGAGAAGAAGGGAAGAGATGTTTACATTCTGGGCTCAGCTAATGTTGGGAAATCTGCTTTCATCAATGCTTTACTAAATACAATGGCTATGAATGATCCAGTTGCTGCAGCTGCACAAAAATACAAACCAATACAGTCTGCCGTTCCTGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTCCTTGGAGGAGGGAAACTGTATGACACCCCTGGAGTTCATCTTCACCATAGGCAAACTGCAGTTGTTCATTCTGAAGATCTAGCTTCCCTTGCTCCTCAAAGCCGACTTAGGGGCCTAACTTTCCCAAGTTCTCAAATATTTTCAGACAATACAGAGGAANGTGCTTCGACAATAAATGGCCTGAATGGGTTTTCGATATTTTGGGGAGGTCTTGTTAGAATTGATGTTTTGAAGGTTCTCCCAGAAACAAGTTTGACATTTTATGGGCCCAAGCGACTACCAATTCACATGGTGCCCACAGAGAAAGCAGATGAATTTTATCAGAAAGAAATTGGTGTTCTGCTAACCCCACCAAGTGGAAGAGACAAGGCTGAGAACTGGAGAGGACTTGACTCAGAACATAAACTGCAAATAAAATTCGAAGATGCTGAAAGGCCAGCTTGTGATATTGCTATATCAGGTCTAGGATGGTTTACTGTTGAGCCGGTTAGTAGGTCACACAAATACTCGCAACAAAAACCAATAGAGACTGCTGGGGAACTGCTTTTGGCCGTGCACGTCCCCGGACCCGTTGAGATTTTTATGAGGTCACCAATACCGGTAGGCAAGGGTGGAGCAGAGTGGTACCAGTACAGAGAGTTAACAGATAAAGAACAGGAAATGAGACCAAAATGGTACTTTTGAATTCGTAGTCTTTTTTTTTTCTCCCTTTTTTTCTTTTATTTTGGGAAGCCATTTCTATAGCCTGAATCTTCGACCTTCACCCAAATCCTCAACCAACCCATTTTACATGTATTATTATTTATTAATGTGATTAATTTTCAAGTTGTACAACAGTCATCTTTTCCAAAGGAGGGAAATTTAAGGATAGCAAAGAAATGATGGTTTTCTCTCTTGATTTTGTAGAATATTTGAATGTTAAGATTATTCTTAAATTTTATTGTGTAAGTTTCACCCTTGCTACTGAGGATGAACAATATCATTACGCGCACAGCTTCAGCTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00490	92384	98259	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K13427	NOA1	EC:1.14.13.39	Arginine biosynthesis	map00220
			Arginine and proline metabolism	map00330
			Plant-pathogen interaction	map04626

Gene Ontology

molecular_function
GO:0005525 GTP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000490s00023913.1	PF01926.18	MMR_HSR1	251	325	4.30E-09

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.800
SRR1783600	control	6.875
SRR1783602	moderate drought stress	8.182
SRR1811619	moderate drought stress	8.125

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.358
DRR006520	Root Summer glycyrrhizin high producing strain	11.082
DRR006521	Root Winter glycyrrhizin high producing strain	12.098
DRR006522	Root Winter glycyrrhizin high producing strain	11.508
DRR006523	Root Summer glycyrrhizin low producing strain	8.609
DRR006524	Root Summer glycyrrhizin low producing strain	8.610
DRR006525	Leaf Summer glycyrrhizin high producing strain	11.172
DRR006526	Leaf Summer glycyrrhizin high producing strain	11.109

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.267
SRR2868004	Drought Stress (root)	8.681
SRR2967015	Control (root)	8.957

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	13.914
SRR9715740	Leaf	18.322
SRR9715741	Leaf	13.292
SRR9715739	Root	2.132
SRR9715742	Root	5.900
SRR9715743	Root	4.995

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.524
SRR8749028	MeJA induced 9h	7.551
SRR8749029	MeJA induced 9h	7.706
SRR8749030	Uninduced	4.386
SRR8749031	Uninduced	6.780
SRR8749032	Uninduced	5.146

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.900
SRR8400027	Control - Root	16.088