Gene detail information of Glyur000489s00017499 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| trEMBL | tr|I3SEP5|I3SEP5_LOTJA | 5.00E-06 | Uncharacterized protein {ECO:0000313|EMBL:AFK38737.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00489 | 147892 | 151061 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.432 |
| SRR1783600 | control | 1.884 |
| SRR1783602 | moderate drought stress | 0.885 |
| SRR1811619 | moderate drought stress | 0.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.845 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.378 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.674 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.426 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.871 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.182 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.439 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.794 |
| SRR2868004 | Drought Stress (root) | 2.198 |
| SRR2967015 | Control (root) | 2.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.803 |
| SRR9715740 | Leaf | 1.038 |
| SRR9715741 | Leaf | 1.126 |
| SRR9715739 | Root | 6.253 |
| SRR9715742 | Root | 4.851 |
| SRR9715743 | Root | 6.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.860 |
| SRR8749028 | MeJA induced 9h | 3.565 |
| SRR8749029 | MeJA induced 9h | 0.912 |
| SRR8749030 | Uninduced | 1.193 |
| SRR8749031 | Uninduced | 3.103 |
| SRR8749032 | Uninduced | 0.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.629 |
| SRR8400027 | Control - Root | 5.548 |