Gene detail information of Glyur000489s00017490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64030.1 | 0 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | XP_004502956.1 | 0 | PREDICTED: probable methyltransferase PMT26-like [Cicer arietinum] |
| Swissprot | tr|Q8L7V3|PMTQ_ARATH | 0 | Probable methyltransferase PMT26 |
| trEMBL | tr|I1JY06|I1JY06_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G38870.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00489 | 54086 | 57791 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000489s00017490.1 | PF03141.11 | Methyltransf_29 | 266 | 782 | 1.30E-207 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 80.966 |
| SRR1783600 | control | 81.044 |
| SRR1783602 | moderate drought stress | 33.126 |
| SRR1811619 | moderate drought stress | 33.131 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 60.157 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 59.134 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 91.561 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 88.946 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 63.903 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 64.593 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.956 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 126.108 |
| SRR2868004 | Drought Stress (root) | 80.669 |
| SRR2967015 | Control (root) | 81.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 56.135 |
| SRR9715740 | Leaf | 37.548 |
| SRR9715741 | Leaf | 55.378 |
| SRR9715739 | Root | 17.570 |
| SRR9715742 | Root | 94.054 |
| SRR9715743 | Root | 79.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 403.294 |
| SRR8749028 | MeJA induced 9h | 335.386 |
| SRR8749029 | MeJA induced 9h | 183.220 |
| SRR8749030 | Uninduced | 129.116 |
| SRR8749031 | Uninduced | 31.452 |
| SRR8749032 | Uninduced | 58.806 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 94.507 |
| SRR8400027 | Control - Root | 118.154 |