Gene detail information of Glyur000489s00017486 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G02210.2 | 6.00E-07 | |
| NR | KHN21833.1 | 1.17E-89 | hypothetical protein glysoja_033692 [Glycine soja] |
| trEMBL | tr|K7MC33|K7MC33_SOYBN | 1.00E-97 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G19533.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00489 | 44932 | 47659 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000489s00017486.1 | PF12776.2 | Myb_DNA-bind_3 | 12 | 105 | 1.50E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.217 |
| SRR1783600 | control | 3.265 |
| SRR1783602 | moderate drought stress | 3.462 |
| SRR1811619 | moderate drought stress | 3.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.999 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.886 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.049 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.716 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.232 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.155 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.637 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.493 |
| SRR2868004 | Drought Stress (root) | 5.908 |
| SRR2967015 | Control (root) | 5.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.494 |
| SRR9715740 | Leaf | 1.238 |
| SRR9715741 | Leaf | 4.273 |
| SRR9715739 | Root | 0.066 |
| SRR9715742 | Root | 2.595 |
| SRR9715743 | Root | 2.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.354 |
| SRR8749028 | MeJA induced 9h | 7.818 |
| SRR8749029 | MeJA induced 9h | 3.257 |
| SRR8749030 | Uninduced | 4.171 |
| SRR8749031 | Uninduced | 1.279 |
| SRR8749032 | Uninduced | 1.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.564 |
| SRR8400027 | Control - Root | 5.562 |