Gene detail information of Glyur000489s00017484 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21390.1 | 2.00E-07 | embryo defective 2170 |
| NR | KHN09622.1 | 6.38E-67 | hypothetical protein glysoja_011896 [Glycine soja] |
| trEMBL | tr|I1KBK7|I1KBK7_SOYBN | 2.00E-67 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G16040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00489 | 36184 | 37572 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.848 |
| SRR1783600 | control | 0.885 |
| SRR1783602 | moderate drought stress | 0.873 |
| SRR1811619 | moderate drought stress | 0.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.123 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.172 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.648 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.599 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.887 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.887 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.491 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.911 |
| SRR2868004 | Drought Stress (root) | 1.768 |
| SRR2967015 | Control (root) | 0.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.834 |
| SRR9715740 | Leaf | 12.657 |
| SRR9715741 | Leaf | 29.579 |
| SRR9715739 | Root | 0.466 |
| SRR9715742 | Root | 1.124 |
| SRR9715743 | Root | 0.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.344 |
| SRR8749028 | MeJA induced 9h | 11.290 |
| SRR8749029 | MeJA induced 9h | 4.734 |
| SRR8749030 | Uninduced | 2.868 |
| SRR8749031 | Uninduced | 1.680 |
| SRR8749032 | Uninduced | 3.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.671 |
| SRR8400027 | Control - Root | 1.182 |