Gene detail

Gene detail information of Glyur000487s00025919.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G02010.1	0	Protein kinase superfamily protein
NR	XP_006588370.1	0	PREDICTED: NAK-like ser/thr protein kinase isoform X1 [Glycine max]
COG	YP_002017974.1	3.00E-21	serine/threonine protein kinase [Pelodictyon phaeoclathratiforme BU-1]
Swissprot	tr\|Q8RWW0\|ALE2_ARATH	1.00E-118	Receptor-like serine/threonine-protein kinase ALE2 (Precursor)
trEMBL	tr\|I1L7N7\|I1L7N7_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G01520.1}

Sequence

Transcript Sequence

>Glyur000487s00025919.1
GTTTGACGCGCCATCGGACGGAGAAAAGACTGTGAAGAGCGCTTTTCAATAGTTTTCATCAATTCATGTAATGTTTTGGGAGTGCTGCCTTGTCCCTTTAAGCCATTACCGTTAGTGTTGTTCCTTTTTTCCGTTAAAGGTGCTCCACTGCTCCACACTCTCTGGTGGGGACCCTCACCGCAATTAAGGCCTCCAAAACAATCAAATAATCGCCCCAAAACCACTAAAATCCTTTCCCCAAACCCAAAAAAGAAAAACACACACACAGACACAGACACCAAGCTTCTCGGGCAGGGCAAGTAAGTGATAACCGGCAACATAACAGGGTGCCGCCACGCCAACGATTCAACTCAGTCATGCACCCCCTCACTCGCCGGAGTTCACTTCCCCTCGCCGTTGATTTCATCCAATTCCCATAGATCTGATCTGAACCGTTCGCGGCCATCCCCGATGTCGCAGCTCATGGTTTCCATCTCTTTAATCGGTGGATTGGAGAAGGTTCAGTGTATGTTGCTGAAAACGTTGCTTGTATTGTTATCTAGCATGGCTTTTATGGTTGATTGTGGTACATATGATACAACACTGGAAGCTCCTTCGCCTTTGGCTGCTACTGTTGTTATTGGTGGTGATGATCTGCCACTACACCCAAATGTTAAAGGGTGGAAGCATTTCCCTTCTCGTGCTGCACCAATTCCATCACGTGCCCATTCACACTTGTCCGTGCCGTTCCCCAAAAGGAGGAGTGAACTGGAATCTCCTGCTTCTTCTGACTTTAAAAGCATTGCCCCTATGCATTCCATTTCTGATGCAATTCCTTCTGCCATGGGTCACCCACCATTGTCCCCTTATGCTTCCAATTGTTGTAAACAAGACATGGTGTTGAAACGAGGCAGTGAGGGCTGCCACTGTGTTTACCCCGTAAAGCTAGACCTTCTTCTTTTGAATGTCTCTCAAAACCCCAACTGGAATCTTTTTCTTGATGAATTGGCTACGCAACTTGGGCTGCAGACCACCCAAATTCAACTGATCAACTTTTATGTACTCAGCTTGTCAACACTGAATATATCGATGTATATCACTCCCCATAAAGGGATCAAGTTCTCGGCCAATGAAGCATCTAGAATAAACTCTTCACTTTTACTGCATAAGGTTCAACTAGACCATAGATTCGTGGCTCCTACTTTAGCTGCATCACCTATAAAAACTCCCGAGAGACNAGAACCTACAGCTACATCATCGAGTACTTCAGACCGGGGAAGACATTCAAATTTGCTCCTTATTCTTGGAATTGTTACCGGCATACTCTTCATTTCCATCATGTGTGTACTTATACTTTGTTTATGCACGCTGCGGCCAAAAACAAAAACACCTCCCACAGAACCGGAAAAGCCAAGGGTGGAAAGTGCAGTTTCAGCTGCTGGGTCTCTTCCCCACCCAACTAGTACACGTTTTATTGCTTATGAAGAACTTAGAGAAGCAACAAACAATTTTGAACCAGCAAGTGTACTTGGTGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGAACTGCTGTTGCAATTAAGAGGCTTACTACAGGAGGGCAGCAGGGTGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCACCGTAACCTTGTAAAACTGGTGGGATACTATAGCAATCGTGACTCATCACAAAATCTGCTATGCTATGAGCTTGTCCCGAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCTTGGGAATAAATTGCCCTCTGGATTGGGACACCAGAATGAAGATTGCACTTGATGCTGCAAGAGGACTTGCATACCTGCATGAAGATTCACAGCCCTGTGTCATACATAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCTGATTTTGGTCTTGCTAAACAGGCACCTGAAGGCAGAGCTAATTACTTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCTATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTACGGGGTTGTCTTGCTGGAACTGTTGACTGGAAGGAAACCTGTGGATATGTCACAGCCAGCTGGACAAGAGAACCTTGTTACTTGGGCAAGGCCAATTCTTAGAGATAAGGACCGGTTAGAGGAACTTGCTGATCCAAGGCTTGGGGGAAGGTACCCAAAGGAAGATTATGTCCGTGTTTGCACCATTGCTGCAGCATGTGTTGCTCCTGAAGCAAGCCAACGACCTACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAATCTCATGACCCCATGTTAGCCTCATCCAATACACGGCCCAACTTGAGACAGTCCTCTACCACTTATGAGTCTGATGGAACATCTTCAATGTTTTCTTCTGGTCCTTACTCTGGTCTTAGTGCCTTTGACTATGACAACATTTCTAGGACAGCTGTTTTCTCTGAAGATCTTCATGAAGGGCGATGAAATTACTTGGAAAAGGCAAGCTAACCACAAATCTGTTCTCCACCCAAAGGTGGTTCACATCATAATTTAGAGATCTTTTCTTTCTCATGGATGAAGGTGGAACCGTAACAGGTGGAATTTTCTTGCAAGTGATTGAAGGTTTCTTGGTGGTGTTGCTGGTTAGGAAGGGGATTCTTCTTCTGTGGTCGCTTTTGCCATCCCTCCAGGGTAAACCACCATCCTGTTTCCCCCNCAAGAGACAGTGGTTCCACTTCCACACGTGGATCAAATTTTGTACATATGTGCATTGTAGTTTGTGTTTTTTTTTCGGATTGACTTCAAAAGCTTTTTAATTTTAATTTGAAAAAAAAAATCATCATAGATTCACTAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00487	22220	27953	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.2.2

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000487s00025919.1	PF00069.20	Pkinase	350	621	1.00E-45

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	27.306
SRR1783600	control	27.720
SRR1783602	moderate drought stress	39.408
SRR1811619	moderate drought stress	39.076

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	25.340
DRR006520	Root Summer glycyrrhizin high producing strain	25.518
DRR006521	Root Winter glycyrrhizin high producing strain	12.282
DRR006522	Root Winter glycyrrhizin high producing strain	11.760
DRR006523	Root Summer glycyrrhizin low producing strain	35.347
DRR006524	Root Summer glycyrrhizin low producing strain	35.455
DRR006525	Leaf Summer glycyrrhizin high producing strain	7.994
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.146

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.894
SRR2868004	Drought Stress (root)	21.425
SRR2967015	Control (root)	26.571

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.367
SRR9715740	Leaf	8.938
SRR9715741	Leaf	9.776
SRR9715739	Root	20.032
SRR9715742	Root	25.023
SRR9715743	Root	23.648

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	13.793
SRR8749028	MeJA induced 9h	10.416
SRR8749029	MeJA induced 9h	7.462
SRR8749030	Uninduced	3.104
SRR8749031	Uninduced	1.876
SRR8749032	Uninduced	2.558

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	37.923
SRR8400027	Control - Root	31.925