Gene detail information of Glyur000487s00025917 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G36659.1 | 7.00E-09 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| NR | XP_003519742.1 | 5.81E-74 | PREDICTED: uncharacterized protein LOC100793343 [Glycine max] |
| trEMBL | tr|I1JBF5|I1JBF5_SOYBN | 2.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G01490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00487 | 20183 | 20890 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000487s00025917.1 | PF04043.10 | PMEI | 84 | 225 | 3.20E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 109.622 |
| SRR1783600 | control | 110.155 |
| SRR1783602 | moderate drought stress | 27.873 |
| SRR1811619 | moderate drought stress | 27.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 102.014 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 100.332 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.210 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.296 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.394 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.044 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.577 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.396 |
| SRR2868004 | Drought Stress (root) | 1.731 |
| SRR2967015 | Control (root) | 2.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.640 |
| SRR9715740 | Leaf | 3.037 |
| SRR9715741 | Leaf | 2.594 |
| SRR9715739 | Root | 86.176 |
| SRR9715742 | Root | 6.915 |
| SRR9715743 | Root | 22.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.322 |
| SRR8749028 | MeJA induced 9h | 7.143 |
| SRR8749029 | MeJA induced 9h | 16.072 |
| SRR8749030 | Uninduced | 0.441 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 118.729 |
| SRR8400027 | Control - Root | 129.811 |