Gene detail information of Glyur000486s00021119 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52070.1 | 4.00E-11 | |
| NR | XP_003605778.1 | 2.01E-45 | hypothetical protein MTR_4g039540 [Medicago truncatula] |
| trEMBL | tr|B7FMD2|B7FMD2_MEDTR | 7.00E-46 | Uncharacterized protein {ECO:0000313|EMBL:AES87975.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00486 | 18311 | 18679 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.719 |
| SRR1811619 | moderate drought stress | 1.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.294 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.291 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.921 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.444 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.929 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.244 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 153.126 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 152.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.356 |
| SRR2868004 | Drought Stress (root) | 1.765 |
| SRR2967015 | Control (root) | 2.935 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 73.381 |
| SRR9715740 | Leaf | 94.404 |
| SRR9715741 | Leaf | 63.397 |
| SRR9715739 | Root | 0.723 |
| SRR9715742 | Root | 0.932 |
| SRR9715743 | Root | 1.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.197 |
| SRR8749028 | MeJA induced 9h | 3.068 |
| SRR8749029 | MeJA induced 9h | 2.246 |
| SRR8749030 | Uninduced | 1.526 |
| SRR8749031 | Uninduced | 0.152 |
| SRR8749032 | Uninduced | 0.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.516 |
| SRR8400027 | Control - Root | 0.908 |