Gene detail information of Glyur000485s00032214 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31130.1 | 2.00E-15 | |
| NR | XP_006582135.1 | 0 | PREDICTED: suppressor protein SRP40 [Glycine max] |
| trEMBL | tr|I1KDM4|I1KDM4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G33970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00485 | 138407 | 143900 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.617 |
| SRR1783600 | control | 8.514 |
| SRR1783602 | moderate drought stress | 19.850 |
| SRR1811619 | moderate drought stress | 19.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.098 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.489 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 48.998 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 47.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.280 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.694 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.655 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.896 |
| SRR2868004 | Drought Stress (root) | 11.153 |
| SRR2967015 | Control (root) | 12.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.279 |
| SRR9715740 | Leaf | 5.817 |
| SRR9715741 | Leaf | 8.417 |
| SRR9715739 | Root | 1.870 |
| SRR9715742 | Root | 16.836 |
| SRR9715743 | Root | 13.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.835 |
| SRR8749028 | MeJA induced 9h | 16.135 |
| SRR8749029 | MeJA induced 9h | 12.342 |
| SRR8749030 | Uninduced | 6.815 |
| SRR8749031 | Uninduced | 8.720 |
| SRR8749032 | Uninduced | 7.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.186 |
| SRR8400027 | Control - Root | 15.409 |