Gene detail information of Glyur000485s00032212 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18130.1 | 5.00E-26 | |
| NR | NP_001239693.1 | 6.33E-85 | uncharacterized protein LOC100810509 [Glycine max] |
| trEMBL | tr|C6T9U3|C6T9U3_SOYBN | 2.00E-85 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G07990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00485 | 79626 | 81461 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.275 |
| SRR1783600 | control | 1.648 |
| SRR1783602 | moderate drought stress | 8.269 |
| SRR1811619 | moderate drought stress | 8.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.898 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.105 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.779 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.585 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.674 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.245 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.464 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.331 |
| SRR2868004 | Drought Stress (root) | 2.319 |
| SRR2967015 | Control (root) | 4.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.451 |
| SRR9715740 | Leaf | 4.886 |
| SRR9715741 | Leaf | 6.661 |
| SRR9715739 | Root | 0.203 |
| SRR9715742 | Root | 1.133 |
| SRR9715743 | Root | 0.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.396 |
| SRR8749028 | MeJA induced 9h | 4.885 |
| SRR8749029 | MeJA induced 9h | 1.175 |
| SRR8749030 | Uninduced | 2.133 |
| SRR8749031 | Uninduced | 3.818 |
| SRR8749032 | Uninduced | 1.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.822 |
| SRR8400027 | Control - Root | 1.577 |