Gene detail information of Glyur000485s00032208 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18130.1 | 1.00E-26 | |
| NR | NP_001239693.1 | 4.06E-65 | uncharacterized protein LOC100810509 [Glycine max] |
| trEMBL | tr|C6T9U3|C6T9U3_SOYBN | 2.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G07990.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00485 | 34079 | 35454 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 30.892 |
| SRR1783600 | control | 29.581 |
| SRR1783602 | moderate drought stress | 55.638 |
| SRR1811619 | moderate drought stress | 53.639 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.022 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.548 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 138.096 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 131.414 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 59.227 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 58.287 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.942 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 71.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.673 |
| SRR2868004 | Drought Stress (root) | 21.448 |
| SRR2967015 | Control (root) | 32.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.043 |
| SRR9715740 | Leaf | 92.578 |
| SRR9715741 | Leaf | 69.260 |
| SRR9715739 | Root | 3.142 |
| SRR9715742 | Root | 9.652 |
| SRR9715743 | Root | 6.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.791 |
| SRR8749028 | MeJA induced 9h | 46.140 |
| SRR8749029 | MeJA induced 9h | 16.734 |
| SRR8749030 | Uninduced | 24.055 |
| SRR8749031 | Uninduced | 37.142 |
| SRR8749032 | Uninduced | 26.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.748 |
| SRR8400027 | Control - Root | 18.527 |