Gene detail information of Glyur000485s00032207 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24790.1 | 8.00E-10 | CONSTANS-like 3 |
| NR | XP_004498823.1 | 8.92E-10 | PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Cicer arietinum] |
| Swissprot | tr|Q9SK53|COL3_ARATH | 3.00E-11 | Zinc finger protein CONSTANS-LIKE 3 |
| trEMBL | tr|Q52ZI7|Q52ZI7_PEA | 6.00E-10 | CONSTANS-LIKE b {ECO:0000313|EMBL:AAX47173.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00485 | 29337 | 31505 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.186 |
| SRR1783600 | control | 0.089 |
| SRR1783602 | moderate drought stress | 0.090 |
| SRR1811619 | moderate drought stress | 0.057 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.174 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.105 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.707 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.816 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.227 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.558 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.007 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.364 |
| SRR9715740 | Leaf | 0.062 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.087 |
| SRR8400027 | Control - Root | 0.002 |