Gene detail information of Glyur000485s00032205 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004489704.1 | 6.46E-12 | PREDICTED: arabinogalactan peptide 21-like [Cicer arietinum] |
| Swissprot | tr|Q9LVC0|AGP14_ARATH | 5.00E-07 | Arabinogalactan peptide 14 (Precursor) |
| trEMBL | tr|G7KZH1|G7KZH1_MEDTR | 5.00E-12 | Transmembrane protein, putative {ECO:0000313|EMBL:AES80848.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00485 | 16594 | 17098 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| -- |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 110.485 |
| SRR1783600 | control | 117.977 |
| SRR1783602 | moderate drought stress | 82.862 |
| SRR1811619 | moderate drought stress | 92.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.225 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.378 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.784 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.304 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.899 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.443 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.420 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 328.732 |
| SRR2868004 | Drought Stress (root) | 191.765 |
| SRR2967015 | Control (root) | 149.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.890 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 2.518 |
| SRR9715739 | Root | 11.124 |
| SRR9715742 | Root | 18.382 |
| SRR9715743 | Root | 12.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.044 |
| SRR8749028 | MeJA induced 9h | 84.752 |
| SRR8749029 | MeJA induced 9h | 52.705 |
| SRR8749030 | Uninduced | 20.813 |
| SRR8749031 | Uninduced | 8.486 |
| SRR8749032 | Uninduced | 27.868 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 98.646 |
| SRR8400027 | Control - Root | 102.711 |