Gene detail information of Glyur000484s00024949 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001241055.1 | 1.56E-11 | uncharacterized protein LOC100809368 [Glycine max] |
| trEMBL | tr|C6TIH4|C6TIH4_SOYBN | 6.00E-12 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G05870.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00484 | 24050 | 25047 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.184 |
| SRR1783600 | control | 6.295 |
| SRR1783602 | moderate drought stress | 5.114 |
| SRR1811619 | moderate drought stress | 5.524 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.818 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.889 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.220 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.649 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.875 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.293 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.914 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.812 |
| SRR2868004 | Drought Stress (root) | 1.722 |
| SRR2967015 | Control (root) | 1.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.133 |
| SRR9715740 | Leaf | 1.150 |
| SRR9715741 | Leaf | 1.011 |
| SRR9715739 | Root | 0.970 |
| SRR9715742 | Root | 1.151 |
| SRR9715743 | Root | 1.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.526 |
| SRR8749028 | MeJA induced 9h | 0.685 |
| SRR8749029 | MeJA induced 9h | 0.668 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.090 |
| SRR8749032 | Uninduced | 0.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.639 |
| SRR8400027 | Control - Root | 2.068 |