Gene detail information of Glyur000482s00021738 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27510.1 | 3.00E-174 | Protein of unknown function (DUF3506) |
| NR | XP_004501935.1 | 0 | PREDICTED: protein EXECUTER 1, chloroplastic-like [Cicer arietinum] |
| Swissprot | tr|Q93YW0|EXEC1_ARATH | 8.00E-111 | Protein EXECUTER 1, chloroplastic (Precursor) |
| trEMBL | tr|G7J5H8|G7J5H8_MEDTR | 0 | Executer 1 {ECO:0000313|EMBL:AES71534.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00482 | 101381 | 107108 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000482s00021738.1 | PF12014.3 | DUF3506 | 486 | 615 | 1.00E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.366 |
| SRR1783600 | control | 15.512 |
| SRR1783602 | moderate drought stress | 21.192 |
| SRR1811619 | moderate drought stress | 21.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.626 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.614 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 74.218 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 71.770 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.205 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.422 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.890 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.365 |
| SRR2868004 | Drought Stress (root) | 19.310 |
| SRR2967015 | Control (root) | 23.398 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 51.797 |
| SRR9715740 | Leaf | 87.079 |
| SRR9715741 | Leaf | 46.344 |
| SRR9715739 | Root | 4.965 |
| SRR9715742 | Root | 17.221 |
| SRR9715743 | Root | 15.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.053 |
| SRR8749028 | MeJA induced 9h | 41.579 |
| SRR8749029 | MeJA induced 9h | 22.106 |
| SRR8749030 | Uninduced | 34.132 |
| SRR8749031 | Uninduced | 51.476 |
| SRR8749032 | Uninduced | 45.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.291 |
| SRR8400027 | Control - Root | 20.559 |