Gene detail information of Glyur000481s00027084 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15830.1 | 2.00E-69 | phosphatidic acid phosphatase-related / PAP2-related |
| NR | XP_004506952.1 | 3.93E-111 | PREDICTED: uncharacterized protein LOC101496358 [Cicer arietinum] |
| Swissprot | tr|Q9LVZ6|PDCT2_ARATH | 6.00E-85 | Phosphatidylcholine:diacylglycerol cholinephosphotransferase 2 |
| trEMBL | tr|G7JGX5|G7JGX5_MEDTR | 5.00E-109 | Phosphatidic acid phosphatase-related/PAP2 protein {ECO:0000313|EMBL:AES86568.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00481 | 82808 | 84492 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000481s00027084.1 | PF14378.1 | PAP2_3 | 122 | 209 | 4.30E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.357 |
| SRR1783600 | control | 23.987 |
| SRR1783602 | moderate drought stress | 12.851 |
| SRR1811619 | moderate drought stress | 12.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.697 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.929 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.857 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.864 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.516 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.367 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.079 |
| SRR2868004 | Drought Stress (root) | 28.592 |
| SRR2967015 | Control (root) | 22.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.898 |
| SRR9715740 | Leaf | 3.294 |
| SRR9715741 | Leaf | 5.290 |
| SRR9715739 | Root | 9.116 |
| SRR9715742 | Root | 14.234 |
| SRR9715743 | Root | 11.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 19.059 |
| SRR8749028 | MeJA induced 9h | 11.463 |
| SRR8749029 | MeJA induced 9h | 11.477 |
| SRR8749030 | Uninduced | 19.253 |
| SRR8749031 | Uninduced | 24.010 |
| SRR8749032 | Uninduced | 21.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.004 |
| SRR8400027 | Control - Root | 30.073 |