Gene detail information of Glyur000481s00027082 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G15840.1 | 6.00E-93 | post-illumination chlorophyll fluorescence increase |
| NR | XP_004506951.1 | 2.06E-18 | PREDICTED: uncharacterized protein LOC101496020 [Cicer arietinum] |
| trEMBL | tr|I3SFH5|I3SFH5_LOTJA | 2.00E-16 | Uncharacterized protein {ECO:0000313|EMBL:AFK39017.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00481 | 67237 | 72997 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.258 |
| SRR1783600 | control | 0.273 |
| SRR1783602 | moderate drought stress | 0.766 |
| SRR1811619 | moderate drought stress | 0.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.088 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.858 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 31.389 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.975 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.555 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.659 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 560.429 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 556.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.052 |
| SRR2868004 | Drought Stress (root) | 0.130 |
| SRR2967015 | Control (root) | 1.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 116.767 |
| SRR9715740 | Leaf | 293.442 |
| SRR9715741 | Leaf | 99.322 |
| SRR9715739 | Root | 0.144 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.675 |
| SRR8749028 | MeJA induced 9h | 2.373 |
| SRR8749029 | MeJA induced 9h | 0.680 |
| SRR8749030 | Uninduced | 2.488 |
| SRR8749031 | Uninduced | 0.374 |
| SRR8749032 | Uninduced | 0.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.686 |
| SRR8400027 | Control - Root | 0.205 |