Gene detail information of Glyur000480s00023797 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14730.1 | 1.00E-61 | Cytochrome b561/ferric reductase transmembrane protein family |
| NR | XP_003638756.1 | 8.75E-132 | Cytochrome b reductase [Medicago truncatula] |
| Swissprot | tr|Q67ZF6|ACFR3_ARATH | 1.00E-84 | Probable transmembrane ascorbate ferrireductase 3 |
| trEMBL | tr|B7FIL2|B7FIL2_MEDTR | 3.00E-132 | Cytochrome b reductase {ECO:0000313|EMBL:AES85894.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00480 | 80842 | 82388 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000480s00023797.1 | PF03188.11 | Cytochrom_B561 | 57 | 187 | 1.30E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.474 |
| SRR1783600 | control | 8.742 |
| SRR1783602 | moderate drought stress | 7.182 |
| SRR1811619 | moderate drought stress | 7.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.097 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.269 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.157 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.153 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.273 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.231 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.326 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.459 |
| SRR2868004 | Drought Stress (root) | 46.352 |
| SRR2967015 | Control (root) | 41.921 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.342 |
| SRR9715740 | Leaf | 1.069 |
| SRR9715741 | Leaf | 2.478 |
| SRR9715739 | Root | 5.085 |
| SRR9715742 | Root | 12.190 |
| SRR9715743 | Root | 10.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.212 |
| SRR8749028 | MeJA induced 9h | 0.381 |
| SRR8749029 | MeJA induced 9h | 0.393 |
| SRR8749030 | Uninduced | 0.695 |
| SRR8749031 | Uninduced | 1.551 |
| SRR8749032 | Uninduced | 1.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.612 |
| SRR8400027 | Control - Root | 15.566 |