Gene detail information of Glyur000480s00023786 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18240.2 | 2.00E-127 | Ribosomal protein S24/S35, mitochondrial |
| NR | XP_004504579.1 | 0 | PREDICTED: uncharacterized protein LOC101512095 [Cicer arietinum] |
| trEMBL | tr|I1K3D6|I1K3D6_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G27040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00480 | 36947 | 39447 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000480s00023786.1 | PF10213.4 | MRP-S28 | 279 | 372 | 5.20E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.081 |
| SRR1783600 | control | 24.345 |
| SRR1783602 | moderate drought stress | 24.656 |
| SRR1811619 | moderate drought stress | 24.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.187 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.715 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 25.896 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.350 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.260 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.015 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.478 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.541 |
| SRR2868004 | Drought Stress (root) | 35.489 |
| SRR2967015 | Control (root) | 37.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.057 |
| SRR9715740 | Leaf | 23.269 |
| SRR9715741 | Leaf | 21.019 |
| SRR9715739 | Root | 8.547 |
| SRR9715742 | Root | 16.978 |
| SRR9715743 | Root | 15.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 88.758 |
| SRR8749028 | MeJA induced 9h | 45.303 |
| SRR8749029 | MeJA induced 9h | 75.073 |
| SRR8749030 | Uninduced | 24.210 |
| SRR8749031 | Uninduced | 17.974 |
| SRR8749032 | Uninduced | 21.420 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.952 |
| SRR8400027 | Control - Root | 32.147 |