Gene detail information of Glyur000479s00019710 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G35985.1 | 7.00E-100 | Senescence/dehydration-associated protein-related |
| NR | KEH30493.1 | 0 | senescence/dehydration-associated-like protein [Medicago truncatula] |
| trEMBL | tr|A0A072UN80|A0A072UN80_MEDTR | 0 | Senescence/dehydration-associated-like protein {ECO:0000313|EMBL:KEH30493.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00479 | 126763 | 130101 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000479s00019710.1 | PF06911.7 | Senescence | 176 | 347 | 1.10E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.487 |
| SRR1783600 | control | 1.533 |
| SRR1783602 | moderate drought stress | 1.823 |
| SRR1811619 | moderate drought stress | 1.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.931 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.564 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 221.273 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 216.487 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 105.016 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 106.603 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.988 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.447 |
| SRR2868004 | Drought Stress (root) | 2.179 |
| SRR2967015 | Control (root) | 5.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.621 |
| SRR9715740 | Leaf | 33.852 |
| SRR9715741 | Leaf | 44.029 |
| SRR9715739 | Root | 6.431 |
| SRR9715742 | Root | 22.372 |
| SRR9715743 | Root | 19.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.598 |
| SRR8749028 | MeJA induced 9h | 7.680 |
| SRR8749029 | MeJA induced 9h | 8.425 |
| SRR8749030 | Uninduced | 1.349 |
| SRR8749031 | Uninduced | 1.127 |
| SRR8749032 | Uninduced | 1.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.737 |
| SRR8400027 | Control - Root | 3.565 |