Gene detail information of Glyur000479s00019693 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64230.2 | 2.00E-06 | ubiquitin-conjugating enzyme 28 |
| NR | EMS63383.1 | 7.80E-07 | Ubiquitin-conjugating enzyme E2 28 [Triticum urartu] |
| Swissprot | tr|P35135|UBC4_SOLLC | 1.00E-07 | Ubiquitin-conjugating enzyme E2-17 kDa |
| trEMBL | tr|M7ZJI2|M7ZJI2_TRIUA | 3.00E-07 | Uncharacterized protein {ECO:0000313|EnsemblPlants:TRIUR3_19458-P1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00479 | 35962 | 37126 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.333 |
| SRR1783600 | control | 8.401 |
| SRR1783602 | moderate drought stress | 8.667 |
| SRR1811619 | moderate drought stress | 8.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 41.931 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.763 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.434 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.379 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.884 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.155 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.036 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 66.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.128 |
| SRR2868004 | Drought Stress (root) | 18.075 |
| SRR2967015 | Control (root) | 9.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 24.000 |
| SRR9715740 | Leaf | 35.980 |
| SRR9715741 | Leaf | 26.844 |
| SRR9715739 | Root | 10.333 |
| SRR9715742 | Root | 23.712 |
| SRR9715743 | Root | 21.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.259 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.185 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.893 |
| SRR8400027 | Control - Root | 9.457 |