Gene detail

Gene detail information of Glyur000479s00019691.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G35040.1	2.00E-80	Basic-leucine zipper (bZIP) transcription factor family protein
NR	XP_004505820.1	1.58E-169	PREDICTED: uncharacterized protein LOC101509009 [Cicer arietinum]
trEMBL	tr\|V7AFW2\|V7AFW2_PHAVU	3.00E-169	Uncharacterized protein {ECO:0000313\|EMBL:ESW03708.1}

Sequence

Transcript Sequence

>Glyur000479s00019691.1
GGTTTCGAGCTTCCAATGGAGGACGGCGAGCTTGATTTCTCGAACCATGAAGTGTTCTCGAGTCCAAACATGGGCGAAATTCCTAGCAGTGGCTCAATGGACAGTTTCTTCGATGAGCTCTTGAAGGACACACACGCTTGCACCCACACCCACACGTGCAACCCCCCTGGCCCTGATTTCTCACACACCCACACGTGTTACCATGTTCACACCAAAATCGTGCCTGCCCCTGCCGATGACCAGGTTGGCACCGACGATACCGCTGAGTCCGCCGAAAAGAAGTCCAAAAAACGGCCACTTGGTAATAAAGAGGCAGTTCGGAAATACCGCGAGAAGAAGAAAGCCAGGGCCGCATCGCTGGAGGACGAGGTTGTGAAATTGAGGGCTTTGAANCAGCACTTGATGAAGAAGTTGCAGGGGCAGGCTGCTTTGGAGGCCGAAATCGCGAGGCTTAAGTGCTTACTGGTTGACATCAGGGGTAGGATTGAAGGAGAAATTGGATCGTTCCCGTATCAGAAATCGTCTAATGCGAACCCACCGATCACAAACATGCCTGGTTCTTATGTGATGAACCCTTGTAATGTGCAGTGTGATGATCGGGTCTATTGCCTTCGTCCCGGAGCGGATGGAAAGATTGCAGATGGTGCGTCGCTAGATGGGGAAGGATTTGGGGGTTGTGAATTTGAGAGTCTCCAGTGTCTTGCAAGCCAGAATATGGGGCTCAAGGAACCTCGTATTTGTGGAGTTGGACAGACAGTATCTAATGTCAATAATTCTGCCTCAAATAAAAGAAAAGGTGATGCCCGGTTATGCACACTTTCTGATTCCAGGGGGGATCTCGTGCAGCAACAGCTGGTTGAAGAATTAATGAAGCGGTGGCTTTCGTTGTTGCCATGAACATGGGGAAGATGGGGTGTGCTCCATCTTTCAGTACTTTGTGCTGTGGACAGGTGAGGCACCAATGTCATTTTGTGTAATATAAACTNGTGAGTGAAGCAATAAAATTGGCTTGTATGGTTGCGGCATTATTCTTTTGGTGGCGTTTACAGTGGGGAAGCGGTTATCCTTCCCTAGTGTGAGGAAGTGGGGCCTATTTGATTGTCAACCACAGTTAAAAAATTTAAAGGTTGTGATTTAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00479	19687	22116	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000479s00019691.1	PF07716.10	bZIP_2	92	147	2.10E-10

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	76.670
SRR1783600	control	77.371
SRR1783602	moderate drought stress	87.885
SRR1811619	moderate drought stress	88.813

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	81.878
DRR006520	Root Summer glycyrrhizin high producing strain	82.708
DRR006521	Root Winter glycyrrhizin high producing strain	136.305
DRR006522	Root Winter glycyrrhizin high producing strain	132.427
DRR006523	Root Summer glycyrrhizin low producing strain	61.263
DRR006524	Root Summer glycyrrhizin low producing strain	61.074
DRR006525	Leaf Summer glycyrrhizin high producing strain	38.711
DRR006526	Leaf Summer glycyrrhizin high producing strain	40.036

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	61.776
SRR2868004	Drought Stress (root)	69.687
SRR2967015	Control (root)	73.035

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	35.747
SRR9715740	Leaf	40.516
SRR9715741	Leaf	41.272
SRR9715739	Root	71.033
SRR9715742	Root	58.097
SRR9715743	Root	62.436

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	39.831
SRR8749028	MeJA induced 9h	46.425
SRR8749029	MeJA induced 9h	39.014
SRR8749030	Uninduced	28.625
SRR8749031	Uninduced	44.842
SRR8749032	Uninduced	39.888

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	62.925
SRR8400027	Control - Root	61.603