Gene detail information of Glyur000478s00024550 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN24472.1 | 0 | hypothetical protein glysoja_014076 [Glycine soja] |
| COG | YP_003073051.1 | 6.00E-40 | Ser/Thr protein phosphatase family protein [Teredinibacter turnerae T7901] |
| trEMBL | tr|I1MQD9|I1MQD9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G33520.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00478 | 141489 | 146885 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000478s00024550.1 | PF00149.23 | Metallophos | 61 | 157 | 3.20E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.640 |
| SRR1783600 | control | 5.695 |
| SRR1783602 | moderate drought stress | 4.343 |
| SRR1811619 | moderate drought stress | 4.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.955 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.855 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.601 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.376 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.062 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.963 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.050 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.061 |
| SRR2868004 | Drought Stress (root) | 12.106 |
| SRR2967015 | Control (root) | 8.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.072 |
| SRR9715740 | Leaf | 6.438 |
| SRR9715741 | Leaf | 4.817 |
| SRR9715739 | Root | 1.350 |
| SRR9715742 | Root | 2.845 |
| SRR9715743 | Root | 2.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.004 |
| SRR8749028 | MeJA induced 9h | 15.285 |
| SRR8749029 | MeJA induced 9h | 11.681 |
| SRR8749030 | Uninduced | 9.161 |
| SRR8749031 | Uninduced | 10.328 |
| SRR8749032 | Uninduced | 12.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.037 |
| SRR8400027 | Control - Root | 11.692 |