Gene detail information of Glyur000477s00024407 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KEH39999.1 | 3.73E-60 | hypothetical protein MTR_1g017500 [Medicago truncatula] |
| trEMBL | tr|A0A072VDA7|A0A072VDA7_MEDTR | 1.00E-60 | Uncharacterized protein {ECO:0000313|EMBL:KEH39999.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00477 | 134557 | 138201 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.314 |
| SRR1783600 | control | 3.224 |
| SRR1783602 | moderate drought stress | 2.635 |
| SRR1811619 | moderate drought stress | 2.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.289 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.046 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.790 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.390 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.368 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.480 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.265 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.537 |
| SRR2868004 | Drought Stress (root) | 12.458 |
| SRR2967015 | Control (root) | 9.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.301 |
| SRR9715740 | Leaf | 41.267 |
| SRR9715741 | Leaf | 38.456 |
| SRR9715739 | Root | 1.001 |
| SRR9715742 | Root | 3.649 |
| SRR9715743 | Root | 3.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.235 |
| SRR8749028 | MeJA induced 9h | 0.490 |
| SRR8749029 | MeJA induced 9h | 0.307 |
| SRR8749030 | Uninduced | 1.032 |
| SRR8749031 | Uninduced | 0.297 |
| SRR8749032 | Uninduced | 0.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.193 |
| SRR8400027 | Control - Root | 3.705 |