Gene detail information of Glyur000477s00024402.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49760.1 | 1.00E-14 | basic leucine-zipper 5 |
| NR | XP_004498959.1 | 1.23E-63 | PREDICTED: G-box-binding factor 2-like [Cicer arietinum] |
| Swissprot | tr|P24068|OCS1_MAIZE | 6.00E-09 | Ocs element-binding factor 1 |
| trEMBL | tr|A0A072VDB1|A0A072VDB1_MEDTR | 4.00E-57 | Basic leucine zipper transcription factor {ECO:0000313|EMBL:KEH40004.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00477 | 90236 | 90670 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000477s00024402.1 | PF07716.10 | bZIP_2 | 57 | 103 | 6.90E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.888 |
| SRR1783600 | control | 0.870 |
| SRR1783602 | moderate drought stress | 6.966 |
| SRR1811619 | moderate drought stress | 6.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.801 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.818 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.510 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.872 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.074 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.789 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.623 |
| SRR2868004 | Drought Stress (root) | 7.837 |
| SRR2967015 | Control (root) | 22.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.588 |
| SRR9715740 | Leaf | 1.529 |
| SRR9715741 | Leaf | 6.775 |
| SRR9715739 | Root | 21.123 |
| SRR9715742 | Root | 18.083 |
| SRR9715743 | Root | 14.585 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.008 |
| SRR8749028 | MeJA induced 9h | 0.141 |
| SRR8749029 | MeJA induced 9h | 0.114 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.126 |
| SRR8749032 | Uninduced | 0.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.643 |
| SRR8400027 | Control - Root | 9.332 |