Gene detail information of Glyur000477s00024397 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10140.1 | 1.00E-11 | Uncharacterised conserved protein UCP031279 |
| NR | XP_004498980.1 | 1.28E-56 | PREDICTED: uncharacterized protein LOC101508556 [Cicer arietinum] |
| trEMBL | tr|I3RZX2|I3RZX2_MEDTR | 3.00E-47 | Uncharacterized protein {ECO:0000313|EMBL:AFK33564.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00477 | 41207 | 42490 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.913 |
| SRR1783600 | control | 23.792 |
| SRR1783602 | moderate drought stress | 30.249 |
| SRR1811619 | moderate drought stress | 32.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 116.274 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 115.153 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 176.489 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 167.742 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 122.790 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 119.435 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.775 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 62.306 |
| SRR2868004 | Drought Stress (root) | 178.750 |
| SRR2967015 | Control (root) | 231.229 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.087 |
| SRR9715740 | Leaf | 29.641 |
| SRR9715741 | Leaf | 37.999 |
| SRR9715739 | Root | 81.015 |
| SRR9715742 | Root | 98.210 |
| SRR9715743 | Root | 98.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 541.223 |
| SRR8749028 | MeJA induced 9h | 504.459 |
| SRR8749029 | MeJA induced 9h | 717.367 |
| SRR8749030 | Uninduced | 104.006 |
| SRR8749031 | Uninduced | 304.946 |
| SRR8749032 | Uninduced | 619.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 68.202 |
| SRR8400027 | Control - Root | 80.412 |