Gene detail information of Glyur000477s00024393 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33800.1 | 4.00E-07 | |
| NR | KHN36976.1 | 2.15E-81 | hypothetical protein glysoja_009004 [Glycine soja] |
| trEMBL | tr|I1MXG8|I1MXG8_SOYBN | 2.00E-81 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G35230.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00477 | 9358 | 10400 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.342 |
| SRR1783600 | control | 13.415 |
| SRR1783602 | moderate drought stress | 5.220 |
| SRR1811619 | moderate drought stress | 5.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.314 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.279 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.546 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.471 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.988 |
| SRR2868004 | Drought Stress (root) | 0.924 |
| SRR2967015 | Control (root) | 1.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.578 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.235 |
| SRR9715739 | Root | 0.134 |
| SRR9715742 | Root | 0.954 |
| SRR9715743 | Root | 0.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.238 |
| SRR8749028 | MeJA induced 9h | 0.485 |
| SRR8749029 | MeJA induced 9h | 0.197 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.629 |
| SRR8400027 | Control - Root | 8.573 |